
Microexon ID | At_3:301494-301498:- |
Species | Arabidopsis thaliana | Coordinates | 3:301494..301498 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GACGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCAATCGGATGATCGATTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCGAGAGTTTGCGA |
Microexon-tag Amino Acid Seq | ANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLR |
Microexon-tag spanning region | 301335-301924 |
Microexon-tag prediction score | 0.9594 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT3G01850.1x |
Reference Transcript ID | AT3G01850.1 |
Gene ID | AT3G01850 |
Gene Name | NA |
Transcript ID | AT3G01850.1 |
Protein ID | AT3G01850.1 |
Gene ID | AT3G01850 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 6.8e-70 |
Motif start | 5 |
Motif end | 202 |
Protein seq | >AT3G01850.1 MVSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVAQM AKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTPVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDK VRALRQKYPTLDIQVDGGLGPSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKAQPTT* |
CDS seq | >AT3G01850.1 ATGGTGTCGCCGAAAATAGCACCGTCGATGCTGTCATCGGACTTCGCAAATCTAGCGGCGGAGGCCAATCGGATGATCGA TTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCG AGAGTTTGCGAAAGCACACTAATGCATATCTTGATTGCCACCTTATGGTGACGAACCCCATGGATTACGTTGCACAGATG GCTAAAGCTGGGGCTTCTGGTTTCACATTCCACGTCGAGGTGGCCCAAGATAATTGGCAACAACTTGTCGAGAAGATTAA GTCTACTGGGATGAGACCAGGCGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTTGAAGGGACAA CTCCGGTTGAAATGGTTCTTGTGATGACTGTAGAACCTGGATTTGGAGGCCAGAAGTTTATGCCTGACATGATGGACAAG GTCCGGGCATTGAGGCAAAAATACCCAACACTTGATATTCAGGTGGATGGCGGCTTAGGCCCTTCAACGATCGACACAGC GGCTGCAGCAGGCGCCAACTGTATTGTTGCTGGAAGTTCAGTGTTTGGAGCTCCGGAGCCAGGAGATGTCATCTCCCTTC TGAGGACCAGTGTTGAGAAAGCCCAACCCACCACTTGA |
Microexon DNA seq | GACGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCCAATCGGATGATCGATTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCGAGAGTTTGCGA |
Microexon-tag Amino Acid seq | ANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLR |
Transcript ID | AT3G01850.2 |
Gene ID | At.11985 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 6.9e-70 |
Motif start | 5 |
Motif end | 202 |
Protein seq | >AT3G01850.2 MVSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVAQM AKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTPVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDK VRALRQKYPTLDIQVDGGLGPSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKAQPTT* |
CDS seq | >AT3G01850.2 ATGGTGTCGCCGAAAATAGCACCGTCGATGCTGTCATCGGACTTCGCAAATCTAGCGGCGGAGGCCAATCGGATGATCGA TTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCG AGAGTTTGCGAAAGCACACTAATGCATATCTTGATTGCCACCTTATGGTGACGAACCCCATGGATTACGTTGCACAGATG GCTAAAGCTGGGGCTTCTGGTTTCACATTCCACGTCGAGGTGGCCCAAGATAATTGGCAACAACTTGTCGAGAAGATTAA GTCTACTGGGATGAGACCAGGCGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTTGAAGGGACAA CTCCGGTTGAAATGGTTCTTGTGATGACTGTAGAACCTGGATTTGGAGGCCAGAAGTTTATGCCTGACATGATGGACAAG GTCCGGGCATTGAGGCAAAAATACCCAACACTTGATATTCAGGTGGATGGCGGCTTAGGCCCTTCAACGATCGACACAGC GGCTGCAGCAGGCGCCAACTGTATTGTTGCTGGAAGTTCAGTGTTTGGAGCTCCGGAGCCAGGAGATGTCATCTCCCTTC TGAGGACCAGTGTTGAGAAAGCCCAACCCACCACTTGA |