Microexon ID At_3:301494-301498:-
Species Arabidopsis thaliana
Coordinates 3:301494..301498
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCAATCGGATGATCGATTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCGAGAGTTTGCGA
Microexon-tag Amino Acid Seq ANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLR
Microexon-tag spanning region301335-301924
Microexon-tag prediction score0.9594
Overlapped with the annotated transcript (%) 100
New Transcript ID AT3G01850.1x
Reference Transcript ID AT3G01850.1
Gene ID AT3G01850
Gene Name NA
Transcript ID AT3G01850.1
Protein ID AT3G01850.1
Gene ID AT3G01850
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 6.8e-70
Motif start 5
Motif end 202
Protein seq >AT3G01850.1
MVSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVAQM
AKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTPVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDK
VRALRQKYPTLDIQVDGGLGPSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKAQPTT*
CDS seq >AT3G01850.1
ATGGTGTCGCCGAAAATAGCACCGTCGATGCTGTCATCGGACTTCGCAAATCTAGCGGCGGAGGCCAATCGGATGATCGA
TTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCG
AGAGTTTGCGAAAGCACACTAATGCATATCTTGATTGCCACCTTATGGTGACGAACCCCATGGATTACGTTGCACAGATG
GCTAAAGCTGGGGCTTCTGGTTTCACATTCCACGTCGAGGTGGCCCAAGATAATTGGCAACAACTTGTCGAGAAGATTAA
GTCTACTGGGATGAGACCAGGCGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTTGAAGGGACAA
CTCCGGTTGAAATGGTTCTTGTGATGACTGTAGAACCTGGATTTGGAGGCCAGAAGTTTATGCCTGACATGATGGACAAG
GTCCGGGCATTGAGGCAAAAATACCCAACACTTGATATTCAGGTGGATGGCGGCTTAGGCCCTTCAACGATCGACACAGC
GGCTGCAGCAGGCGCCAACTGTATTGTTGCTGGAAGTTCAGTGTTTGGAGCTCCGGAGCCAGGAGATGTCATCTCCCTTC
TGAGGACCAGTGTTGAGAAAGCCCAACCCACCACTTGA
Microexon DNA seq GACGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCCAATCGGATGATCGATTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCGAGAGTTTGCGA
Microexon-tag Amino Acid seq ANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLR
Transcript ID AT3G01850.2
Gene ID At.11985
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 6.9e-70
Motif start 5
Motif end 202
Protein seq >AT3G01850.2
MVSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVAQM
AKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTPVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDK
VRALRQKYPTLDIQVDGGLGPSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKAQPTT*
CDS seq >AT3G01850.2
ATGGTGTCGCCGAAAATAGCACCGTCGATGCTGTCATCGGACTTCGCAAATCTAGCGGCGGAGGCCAATCGGATGATCGA
TTTGGGCGCCAACTGGCTTCACATGGATATTATGGACGGGCATTTTGTCCCTAATCTTACGATTGGTGCTCCTGTCATCG
AGAGTTTGCGAAAGCACACTAATGCATATCTTGATTGCCACCTTATGGTGACGAACCCCATGGATTACGTTGCACAGATG
GCTAAAGCTGGGGCTTCTGGTTTCACATTCCACGTCGAGGTGGCCCAAGATAATTGGCAACAACTTGTCGAGAAGATTAA
GTCTACTGGGATGAGACCAGGCGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTTGAAGGGACAA
CTCCGGTTGAAATGGTTCTTGTGATGACTGTAGAACCTGGATTTGGAGGCCAGAAGTTTATGCCTGACATGATGGACAAG
GTCCGGGCATTGAGGCAAAAATACCCAACACTTGATATTCAGGTGGATGGCGGCTTAGGCCCTTCAACGATCGACACAGC
GGCTGCAGCAGGCGCCAACTGTATTGTTGCTGGAAGTTCAGTGTTTGGAGCTCCGGAGCCAGGAGATGTCATCTCCCTTC
TGAGGACCAGTGTTGAGAAAGCCCAACCCACCACTTGA