
Microexon ID | At_1:23473160-23473164:- |
Species | Arabidopsis thaliana | Coordinates | 1:23473160..23473164 |
Microexon Cluster ID | MEP06 |
Size | 5 |
Phase | 0 |
Pfam Domain Motif | Ribul_P_3_epim |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,5,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GACGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTAAGCGGATGATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTGTCATCGAGAGTTTGAGG |
Microexon-tag Amino Acid Seq | AKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLR |
Microexon-tag spanning region | 23473023-23473521 |
Microexon-tag prediction score | 0.96 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G63290.1x |
Reference Transcript ID | AT1G63290.1 |
Gene ID | AT1G63290 |
Gene Name | NA |
Transcript ID | AT1G63290.1 |
Protein ID | AT1G63290.1 |
Gene ID | AT1G63290 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.4e-70 |
Motif start | 7 |
Motif end | 204 |
Protein seq | >AT1G63290.1 MVGVSPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVD QMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTPVEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMM DKVRALRNKYPTLDIEVDGGLGPSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRASVEKAQPST* |
CDS seq | >AT1G63290.1 ATGGTGGGTGTGTCGCCGAAGATCGCTCCGTCGATGTTGTCATCGGACTTTGCAAATCTTGCCGCGGAGGCTAAGCGGAT GATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTG TCATCGAGAGTTTGAGGAAGCACACAAATGCATATCTTGATTGCCACTTAATGGTGACGAACCCCATGGATTATGTGGAT CAGATGGCTAAAGCTGGGGCGTCTGGTTTCACATTCCACGTTGAGGTGGCCCAAGAGAATTGGCAAGAACTTGTGAAGAA GATTAAGGCTGCTGGGATGAGGCCAGGTGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTCGAAG GTACAAATCCGGTCGAAATGGTTCTTGTGATGACTGTGGAGCCTGGATTTGGAGGCCAGAAGTTCATGCCCAGCATGATG GACAAGGTCAGGGCATTGAGGAACAAGTACCCAACACTTGATATTGAGGTGGACGGCGGCTTAGGCCCTTCCACAATCGA TGCAGCAGCTGCAGCTGGAGCCAACTGTATCGTCGCAGGAAGTTCAGTGTTTGGAGCTCCGAAGCCTGGGGACGTCATAT CCCTTTTGCGGGCTAGTGTTGAGAAAGCACAACCCTCCACTTAA |
Microexon DNA seq | GACGG |
Microexon Amino Acid seq | DG |
Microexon-tag DNA Seq | GCTAAGCGGATGATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTGTCATCGAGAGTTTGAGG |
Microexon-tag Amino Acid seq | AKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLR |
Transcript ID | AT1G63290.1 |
Gene ID | At.5459 |
Gene Name | NA |
Pfam domain motif | Ribul_P_3_epim |
Motif E-value | 1.4e-70 |
Motif start | 7 |
Motif end | 204 |
Protein seq | >AT1G63290.1 MVGVSPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVD QMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTPVEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMM DKVRALRNKYPTLDIEVDGGLGPSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRASVEKAQPST* |
CDS seq | >AT1G63290.1 ATGGTGGGTGTGTCGCCGAAGATCGCTCCGTCGATGTTGTCATCGGACTTTGCAAATCTTGCCGCGGAGGCTAAGCGGAT GATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTG TCATCGAGAGTTTGAGGAAGCACACAAATGCATATCTTGATTGCCACTTAATGGTGACGAACCCCATGGATTATGTGGAT CAGATGGCTAAAGCTGGGGCGTCTGGTTTCACATTCCACGTTGAGGTGGCCCAAGAGAATTGGCAAGAACTTGTGAAGAA GATTAAGGCTGCTGGGATGAGGCCAGGTGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTCGAAG GTACAAATCCGGTCGAAATGGTTCTTGTGATGACTGTGGAGCCTGGATTTGGAGGCCAGAAGTTCATGCCCAGCATGATG GACAAGGTCAGGGCATTGAGGAACAAGTACCCAACACTTGATATTGAGGTGGACGGCGGCTTAGGCCCTTCCACAATCGA TGCAGCAGCTGCAGCTGGAGCCAACTGTATCGTCGCAGGAAGTTCAGTGTTTGGAGCTCCGAAGCCTGGGGACGTCATAT CCCTTTTGCGGGCTAGTGTTGAGAAAGCACAACCCTCCACTTAA |