Microexon ID At_1:23473160-23473164:-
Species Arabidopsis thaliana
Coordinates 1:23473160..23473164
Microexon Cluster ID MEP06
Size 5
Phase 0
Pfam Domain Motif Ribul_P_3_epim
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,5,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYSAGCGCATGSTCMRYTKYGGYGCYGAYTGGCTYCACATGGACATCATGGATGGGCAYTTTGTYCCWAAYYTWACWATTGGTGCTCCAGTYATYGAGAGTTTGAGR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCTAAGCGGATGATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTGTCATCGAGAGTTTGAGG
Microexon-tag Amino Acid Seq AKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLR
Microexon-tag spanning region23473023-23473521
Microexon-tag prediction score0.96
Overlapped with the annotated transcript (%) 100
New Transcript ID AT1G63290.1x
Reference Transcript ID AT1G63290.1
Gene ID AT1G63290
Gene Name NA
Transcript ID AT1G63290.1
Protein ID AT1G63290.1
Gene ID AT1G63290
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 1.4e-70
Motif start 7
Motif end 204
Protein seq >AT1G63290.1
MVGVSPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVD
QMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTPVEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMM
DKVRALRNKYPTLDIEVDGGLGPSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRASVEKAQPST*
CDS seq >AT1G63290.1
ATGGTGGGTGTGTCGCCGAAGATCGCTCCGTCGATGTTGTCATCGGACTTTGCAAATCTTGCCGCGGAGGCTAAGCGGAT
GATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTG
TCATCGAGAGTTTGAGGAAGCACACAAATGCATATCTTGATTGCCACTTAATGGTGACGAACCCCATGGATTATGTGGAT
CAGATGGCTAAAGCTGGGGCGTCTGGTTTCACATTCCACGTTGAGGTGGCCCAAGAGAATTGGCAAGAACTTGTGAAGAA
GATTAAGGCTGCTGGGATGAGGCCAGGTGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTCGAAG
GTACAAATCCGGTCGAAATGGTTCTTGTGATGACTGTGGAGCCTGGATTTGGAGGCCAGAAGTTCATGCCCAGCATGATG
GACAAGGTCAGGGCATTGAGGAACAAGTACCCAACACTTGATATTGAGGTGGACGGCGGCTTAGGCCCTTCCACAATCGA
TGCAGCAGCTGCAGCTGGAGCCAACTGTATCGTCGCAGGAAGTTCAGTGTTTGGAGCTCCGAAGCCTGGGGACGTCATAT
CCCTTTTGCGGGCTAGTGTTGAGAAAGCACAACCCTCCACTTAA
Microexon DNA seq GACGG
Microexon Amino Acid seq DG
Microexon-tag DNA Seq GCTAAGCGGATGATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTGTCATCGAGAGTTTGAGG
Microexon-tag Amino Acid seq AKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLR
Transcript ID AT1G63290.1
Gene ID At.5459
Gene Name NA
Pfam domain motif Ribul_P_3_epim
Motif E-value 1.4e-70
Motif start 7
Motif end 204
Protein seq >AT1G63290.1
MVGVSPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVD
QMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTPVEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMM
DKVRALRNKYPTLDIEVDGGLGPSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRASVEKAQPST*
CDS seq >AT1G63290.1
ATGGTGGGTGTGTCGCCGAAGATCGCTCCGTCGATGTTGTCATCGGACTTTGCAAATCTTGCCGCGGAGGCTAAGCGGAT
GATCGATTTGGGCGCCAATTGGCTTCACATGGACATTATGGACGGGCATTTTGTTTCTAACCTAACGATTGGTGCTCCTG
TCATCGAGAGTTTGAGGAAGCACACAAATGCATATCTTGATTGCCACTTAATGGTGACGAACCCCATGGATTATGTGGAT
CAGATGGCTAAAGCTGGGGCGTCTGGTTTCACATTCCACGTTGAGGTGGCCCAAGAGAATTGGCAAGAACTTGTGAAGAA
GATTAAGGCTGCTGGGATGAGGCCAGGTGTGGCTCTAAAGCCTGGAACACCTGTTGAACAAGTCTATCCTCTGGTCGAAG
GTACAAATCCGGTCGAAATGGTTCTTGTGATGACTGTGGAGCCTGGATTTGGAGGCCAGAAGTTCATGCCCAGCATGATG
GACAAGGTCAGGGCATTGAGGAACAAGTACCCAACACTTGATATTGAGGTGGACGGCGGCTTAGGCCCTTCCACAATCGA
TGCAGCAGCTGCAGCTGGAGCCAACTGTATCGTCGCAGGAAGTTCAGTGTTTGGAGCTCCGAAGCCTGGGGACGTCATAT
CCCTTTTGCGGGCTAGTGTTGAGAAAGCACAACCCTCCACTTAA