| Microexon ID | Pt_5:7729547-7729550:- |
| Species | Populus Trichocarpa | Coordinates | 5:7729547..7729550 |
| Microexon Cluster ID | MEP05 |
| Size | 4 |
| Phase | 2 |
| Pfam Domain Motif | Helicase_C |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 53,4,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | GATGAYTGGMTTTCWKCSARRAYWCAAGTTGTWGTKGCHACWGTRGCWTTTGGRATGGGWATWGATARRMARGATGTYMGDATTGTKTGYCAYTTYAAYWTKCCWAAR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GATG |
| Microexon Amino Acid seq | GM |
| Microexon-tag DNA Seq | GATGATTGGATTTCTTCTAAAATACAAGTTGTTGTGGCCACAGTGGCTTTTGGGATGGGTATAGATAGAAAAGATGTTAGAATGGTTTGCCACTTTAACATTCCAAAG |
| Microexon-tag Amino Acid Seq | DDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPK |
| Microexon-tag spanning region | 7729370-7729901 |
| Microexon-tag prediction score | 0.971 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.005G107400.1.v4.1x |
| Reference Transcript ID | Potri.005G107400.1.v4.1 |
| Gene ID | Potri.005G107400.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.005G107400.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.005G107400.v4.1 |
| Gene Name | |
| Pfam domain motif | Helicase_C |
| Motif E-value | 9.20E-17 |
| Motif start | 257 |
| Motif end | 351 |
| Protein seq | >Potri.005G107400.1.v4.1 MKKSPLPMVQNTSSKDEKRTRKETLVKLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKRGIV LVVSPLIALMENQVMALKEKGIAAEFLSSTQTSSVRNKIHEDLDSGKPSVRLLYVTPELIATPGFMSKLTKIHTRGLLNL IAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESLCLQDPLVLSSSFNRPNIYYEVRYKDL LDDAYADLSSVLKSCGDICAIVYCLERTTCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMG IDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSLLYYGVDDHKKMEFILRNAENKKLQSSSSKGELSKKSLTDFNL MIEYCEGSGCRRKKILESFGEQVSATLCKKSCDACKHPNLVAKYLEELTTSIARQRNGFSRVFMSRSTDMIDEEFRIDEQ FSEFWNRDDEGKSSEEDISDFDDETEVVKSLPRSRLSRKSGVDEKIELLQRAEENYYQNKNFDKLKNKVDKNAISETLRE ASKQRLLNALKLAHKRLGILNIELDTSASFLENECYKKYGKSGKTFYYSQVASTVRWLSSTTLVELTNRLGPGTPSVPVS KEHPPETPPSPLLEQRPPETTNLKRHSSFHSPLLEQKSPETTTPRLDHTFQSETSMNTSPSESSSLSTKLPSIPSFSEFV NSKKEKGNHANTSQNQSHMRLEKTGEKRLRLH* |
| CDS seq | >Potri.005G107400.1.v4.1 ATGAAGAAGTCACCGTTGCCAATGGTGCAAAACACAAGCAGCAAGGATGAAAAGAGAACAAGAAAAGAAACGCTAGTGAA GCTGTTAAGATGGCATTTTGGGTATCAAGATTTTAGAGGCAAACAGTTAGAAGCCATTGAAGCTGTTTTATCAGGGAGGG ATTGTTTTTGTTTGATGCCAACTGGTGGAGGGAAGTCAATGTGTTATCAAATTCCTGCTCTTGCTAAACGTGGGATTGTT CTTGTCGTGTCTCCTTTGATTGCCTTGATGGAGAACCAAGTGATGGCCTTGAAGGAGAAAGGAATTGCAGCTGAATTTCT TTCATCGACTCAAACATCAAGTGTTAGAAATAAAATTCATGAAGATCTGGACTCTGGAAAACCATCTGTGAGGCTGCTGT ATGTAACACCAGAATTAATTGCAACACCAGGATTTATGTCGAAGCTGACAAAGATTCACACCAGAGGGTTGTTGAATCTC ATTGCCATAGATGAGGCACATTGCATTTCGTCATGGGGTCATGATTTCAGGCCTAGCTACCGTAAGCTTTCATCTTTGAG GAATCACCTTCCAGATGTACCAGTCCTGGCTTTGACAGCTACAGCTGCTCCTAAAGTTCAGAATGATGTGATAGAGTCAT TATGTCTGCAAGACCCTTTGGTTCTCAGCTCTTCTTTCAATCGTCCAAATATTTATTATGAAGTTCGATACAAAGATCTT CTGGATGATGCCTACGCTGATTTATCCTCTGTACTCAAATCTTGTGGGGATATCTGTGCAATTGTTTACTGCCTTGAACG AACAACCTGTGATGGCTTGTCTGCTCATCTTTCCAAAAATGGCATTTCCTCTGCTGCTTACCACGCTGGCTTGAATAATA AACTGCGGAGCTCAGTTTTAGATGATTGGATTTCTTCTAAAATACAAGTTGTTGTGGCCACAGTGGCTTTTGGGATGGGT ATAGATAGAAAAGATGTTAGAATGGTTTGCCACTTTAACATTCCAAAGTCAATGGAGTCCTTCTATCAAGAATCAGGTAG AGCAGGACGTGACCAGCTTCCATCCAGAAGTCTCTTGTACTATGGAGTTGATGATCACAAAAAGATGGAGTTCATTTTAA GAAATGCTGAGAACAAGAAGCTGCAGTCCTCAAGTTCAAAGGGCGAGTTGTCAAAAAAGTCCCTCACTGACTTCAATCTG ATGATTGAGTACTGTGAGGGTTCTGGATGCCGTCGGAAAAAGATTCTTGAGAGTTTTGGGGAACAGGTTTCTGCCACACT ATGTAAAAAATCATGTGATGCCTGCAAACATCCAAATCTAGTTGCCAAGTATTTGGAGGAACTTACAACTAGCATTGCTC GTCAGAGAAATGGTTTTTCTCGAGTTTTTATGAGCAGGTCCACAGATATGATTGATGAAGAATTCAGAATTGATGAACAA TTCTCTGAATTCTGGAATCGGGACGATGAAGGCAAAAGTTCTGAGGAAGATATATCTGATTTTGATGATGAAACTGAAGT TGTCAAGAGCCTACCTAGATCAAGATTGTCAAGAAAATCAGGAGTAGATGAGAAGATTGAGTTGCTGCAGCGTGCGGAAG AAAATTATTATCAGAATAAAAACTTTGATAAACTGAAAAATAAAGTTGACAAGAATGCCATATCTGAAACACTGAGAGAA GCAAGCAAACAAAGATTATTAAATGCTTTGAAGCTAGCTCACAAGCGGCTTGGAATCTTAAACATTGAACTTGATACATC AGCCTCCTTCCTTGAAAATGAGTGCTACAAGAAGTACGGAAAGAGTGGAAAAACGTTCTACTATTCTCAGGTGGCAAGTA CAGTAAGGTGGCTATCATCAACTACTTTGGTAGAGTTAACGAATCGGCTCGGCCCTGGCACCCCTTCCGTCCCTGTGTCT AAAGAACATCCTCCTGAGACACCACCATCACCCTTGCTTGAGCAGAGGCCACCAGAAACTACTAACCTAAAACGCCACAG TAGCTTTCATTCACCCTTGCTTGAGCAGAAGTCACCAGAAACTACTACCCCAAGACTCGACCATACATTTCAATCAGAAA CTTCGATGAATACTTCACCGTCAGAAAGTTCCAGCCTGAGTACAAAGCTGCCATCCATTCCATCCTTTTCCGAGTTTGTG AACAGCAAAAAGGAAAAAGGCAACCATGCCAATACATCACAAAACCAATCACACATGAGACTGGAGAAGACCGGAGAGAA GAGGCTGAGGCTGCATTAA |
Pt_5:7729547-7729550:- does not have available information here.