Microexon ID Ps_NW_020618825.1:17288470-17288473:-
Species Papaver somniferum
Coordinates NW_020618825.1:17288470..17288473
Microexon Cluster ID MEP05
Size 4
Phase 2
Pfam Domain Motif Helicase_C
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 53,4,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GATGAYTGGMTTTCWKCSARRAYWCAAGTTGTWGTKGCHACWGTRGCWTTTGGRATGGGWATWGATARRMARGATGTYMGDATTGTKTGYCAYTTYAAYWTKCCWAAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AATG
Microexon Amino Acid seq GM
Microexon-tag DNA Seq GAAAATTGGCTTACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAATATCCCTAAA
Microexon-tag Amino Acid Seq ENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFNIPK
Microexon-tag spanning region17288314-17288812
Microexon-tag prediction score0.9551
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026574575.1x
Reference Transcript ID XM_026574575.1
Gene ID NA
Gene Name NA
Transcript ID XM_026574575.1
Protein ID XP_026430360.1
Gene ID LOC113326913
Gene Name NA
Pfam domain motif Helicase_C
Motif E-value 2.3e-16
Motif start 237
Motif end 337
Protein seq >XP_026430360.1
MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME
NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG
HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEVRYKDLLDDVYADLSKQLK
SNGDVCGIIYCLERTTCEDLSAHLLENGITSAAYHAGLNSEQRSTVLENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFN
IPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGITLSALLEFILRELENEHANSSSSVSDSSKKALADFNQMVEYC
KESGCRRRKILKSFEEKVSALCSGTCDACKNPFLVAKNLEELARSARRMTTFTCNVSRHFYN*
CDS seq >XM_026574575.1
ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT
CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA
AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA
AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA
GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT
CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA
CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC
TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA
ACCGTCCTAATATATTTTATGAAGTTCGTTATAAAGATCTTCTGGATGATGTCTATGCTGATTTGTCTAAGCAACTCAAG
TCTAATGGAGATGTATGCGGAATCATTTATTGCCTTGAACGTACAACATGTGAAGATTTGTCAGCTCATCTGTTAGAGAA
TGGCATCACTTCCGCCGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTTACTTCCA
AAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAAT
ATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTTTGTTATA
CTATGGAACGGATGATCGCAGAAAAATGGGTATAACACTATCTGCATTATTAGAATTTATTCTCCGTGAACTAGAGAACG
AGCATGCAAACTCTTCAAGCTCCGTCAGTGACTCATCTAAAAAAGCCTTGGCAGACTTCAATCAGATGGTTGAATATTGC
AAAGAATCTGGGTGCCGCAGGAGAAAAATTCTCAAGAGCTTTGAGGAAAAGGTATCTGCACTATGTAGCGGAACATGTGA
TGCCTGCAAGAATCCATTTTTAGTTGCTAAGAACCTGGAGGAACTTGCTCGTTCTGCTCGTCGAATGACTACCTTCACTT
GTAACGTAAGCAGACACTTTTATAACTAG
Microexon DNA seq AATG
Microexon Amino Acid seq GM
Microexon-tag DNA Seq GAAAATTGGCTTACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAATATCCCTAAA
Microexon-tag Amino Acid seq ENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFNIPK
Transcript ID XR_003348595.1
Gene ID Ps.69429
Gene Name NA
Pfam domain motif Helicase_C
Motif E-value 6.5e-13
Motif start 214
Motif end 286
Protein seq >XR_003348595.1
MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME
NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG
HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEAYHAGLNSEQRSTVLENWL
TSKVQVVVATVAFGMGIDKKDVRIVCHFNIPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGIYSP*
CDS seq >XR_003348595.1
ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT
CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA
AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA
AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA
GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT
CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA
CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC
TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA
ACCGTCCTAATATATTTTATGAAGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTT
ACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCA
TTTCAATATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTT
TGTTATACTATGGAACGGATGATCGCAGAAAAATGGGAATTTATTCTCCGTGA