
Microexon ID | Ps_NW_020618825.1:17288470-17288473:- |
Species | Papaver somniferum | Coordinates | NW_020618825.1:17288470..17288473 |
Microexon Cluster ID | MEP05 |
Size | 4 |
Phase | 2 |
Pfam Domain Motif | Helicase_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 53,4,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GATGAYTGGMTTTCWKCSARRAYWCAAGTTGTWGTKGCHACWGTRGCWTTTGGRATGGGWATWGATARRMARGATGTYMGDATTGTKTGYCAYTTYAAYWTKCCWAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AATG |
Microexon Amino Acid seq | GM |
Microexon-tag DNA Seq | GAAAATTGGCTTACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAATATCCCTAAA |
Microexon-tag Amino Acid Seq | ENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFNIPK |
Microexon-tag spanning region | 17288314-17288812 |
Microexon-tag prediction score | 0.9551 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026574575.1x |
Reference Transcript ID | XM_026574575.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026574575.1 |
Protein ID | XP_026430360.1 |
Gene ID | LOC113326913 |
Gene Name | NA |
Pfam domain motif | Helicase_C |
Motif E-value | 2.3e-16 |
Motif start | 237 |
Motif end | 337 |
Protein seq | >XP_026430360.1 MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEVRYKDLLDDVYADLSKQLK SNGDVCGIIYCLERTTCEDLSAHLLENGITSAAYHAGLNSEQRSTVLENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFN IPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGITLSALLEFILRELENEHANSSSSVSDSSKKALADFNQMVEYC KESGCRRRKILKSFEEKVSALCSGTCDACKNPFLVAKNLEELARSARRMTTFTCNVSRHFYN* |
CDS seq | >XM_026574575.1 ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA ACCGTCCTAATATATTTTATGAAGTTCGTTATAAAGATCTTCTGGATGATGTCTATGCTGATTTGTCTAAGCAACTCAAG TCTAATGGAGATGTATGCGGAATCATTTATTGCCTTGAACGTACAACATGTGAAGATTTGTCAGCTCATCTGTTAGAGAA TGGCATCACTTCCGCCGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTTACTTCCA AAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAAT ATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTTTGTTATA CTATGGAACGGATGATCGCAGAAAAATGGGTATAACACTATCTGCATTATTAGAATTTATTCTCCGTGAACTAGAGAACG AGCATGCAAACTCTTCAAGCTCCGTCAGTGACTCATCTAAAAAAGCCTTGGCAGACTTCAATCAGATGGTTGAATATTGC AAAGAATCTGGGTGCCGCAGGAGAAAAATTCTCAAGAGCTTTGAGGAAAAGGTATCTGCACTATGTAGCGGAACATGTGA TGCCTGCAAGAATCCATTTTTAGTTGCTAAGAACCTGGAGGAACTTGCTCGTTCTGCTCGTCGAATGACTACCTTCACTT GTAACGTAAGCAGACACTTTTATAACTAG |
Microexon DNA seq | AATG |
Microexon Amino Acid seq | GM |
Microexon-tag DNA Seq | GAAAATTGGCTTACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAATATCCCTAAA |
Microexon-tag Amino Acid seq | ENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFNIPK |
Transcript ID | XR_003348595.1 |
Gene ID | Ps.69429 |
Gene Name | NA |
Pfam domain motif | Helicase_C |
Motif E-value | 6.5e-13 |
Motif start | 214 |
Motif end | 286 |
Protein seq | >XR_003348595.1 MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEAYHAGLNSEQRSTVLENWL TSKVQVVVATVAFGMGIDKKDVRIVCHFNIPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGIYSP* |
CDS seq | >XR_003348595.1 ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA ACCGTCCTAATATATTTTATGAAGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTT ACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCA TTTCAATATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTT TGTTATACTATGGAACGGATGATCGCAGAAAAATGGGAATTTATTCTCCGTGA |