
Microexon ID | Gm_9:7202001-7202004:- |
Species | Glycine max | Coordinates | 9:7202001..7202004 |
Microexon Cluster ID | MEP05 |
Size | 4 |
Phase | 2 |
Pfam Domain Motif | Helicase_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 53,4,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GATGAYTGGMTTTCWKCSARRAYWCAAGTTGTWGTKGCHACWGTRGCWTTTGGRATGGGWATWGATARRMARGATGTYMGDATTGTKTGYCAYTTYAAYWTKCCWAAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AATG |
Microexon Amino Acid seq | GM |
Microexon-tag DNA Seq | GATGATTGGATATCTTCCAAGATAAAAGTTGTTGTTGCTACTGTTGCTTTTGGAATGGGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAACATTCCCAAG |
Microexon-tag Amino Acid Seq | DDWISSKIKVVVATVAFGMGIDRKDVRIVCHFNIPK |
Microexon-tag spanning region | 7201832-7207379 |
Microexon-tag prediction score | 0.9635 |
Overlapped with the annotated transcript (%) | 85.71 |
New Transcript ID | KRH37506x |
Reference Transcript ID | KRH37506 |
Gene ID | GLYMA_09G070600 |
Gene Name | NA |
Gm_9:7202001-7202004:- does not have available information here.
Microexon DNA seq | AATG |
Microexon Amino Acid seq | GM |
Microexon-tag DNA Seq | GATGATTGGATATCTTCCAAGATAAAAGTTGTTGTTGCTACTGTTGCTTTTGGAATGGGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAACATTCCCAAG |
Microexon-tag Amino Acid seq | DDWISSKIKVVVATVAFGMGIDRKDVRIVCHFNIPK |
Transcript ID | Gm.52479.2 |
Gene ID | Gm.52479 |
Gene Name | NA |
Pfam domain motif | Helicase_C |
Motif E-value | 9.8e-16 |
Motif start | 253 |
Motif end | 351 |
Protein seq | >Gm.52479.2 MQKSALPLSDANANKKREELRRKETLVKLLRWHFGYPDFRDMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGI VLVVCPLIALMENQVMALKEKGIAAEFLSSTKTTDAKVKIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLN LIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAVPKVQKDVVESLQMQNPLMLKSSFNRPNIYYEVRYKD LLDDAYADLSNTLKSLGDVCAIVYCLERSMCDDLSTNLSQNGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGM GIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILRKSVSKKSQSSSSQEESSKMSLIAFN LMVEYCEGSGCRRKRVLESFGEQVTASLCGKTCDGCRHPNLVARYLEDLTTACALRQKNGSSRVFMTSSTDAINGEQLSE FWNQDEEASGSEEDISDSDDGNEVVNNLTRSKLQSKLGVSEKLAMLQRAEENFYRNNNAYKQSNKVDKNAISDPMRGSSR QRLQNALKQVQQRLDNFKIEMETSASFLEEECYKKYGKVGKSFYYSQVASTVRWLTTASSSELINRLSAINASTSMNVLS EAENLLIPANQPLTPAEQPLTSPPALDPYARDTSNEHSGTARSETSACVLPMEGSFSTNLPQIPSFSEFVNSRKAKGDQL HDTKRHSSRVEKKMRIQ* |
CDS seq | >Gm.52479.2 ATGCAGAAGTCGGCATTGCCACTGAGCGACGCGAATGCGAACAAGAAGAGGGAGGAATTGCGCCGCAAGGAAACGTTGGT GAAGCTTCTGAGATGGCATTTTGGGTACCCCGATTTCAGGGACATGCAATTGGACGCTATTCAAGCTGTGCTCTCAGGGA AAGATTGTTTTTGTCTTATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCAAAAGCAGGCATT GTGCTTGTCGTTTGCCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATAGCGGCAGAATT TCTCTCCTCAACGAAAACAACAGATGCAAAAGTAAAGATTCATGAGGACCTTGATTCTGGAAAACCTTCTACGAGGCTGC TATATGTGACTCCAGAGTTGATAACAACACCAGGGTTTATGACTAAGCTGACAAAGATTTATACCAGGGGGTTGCTAAAT CTGATTGCGATAGATGAGGCGCATTGCATCTCATCTTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTATCCTCTTT GAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGTGCCTAAGGTTCAGAAGGATGTAGTTGAAT CCTTGCAGATGCAAAATCCATTAATGCTCAAGTCTTCATTTAATCGTCCTAATATATATTATGAAGTTAGATACAAAGAT CTGTTGGATGATGCTTATGCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCAATAGTGTACTGCCTTGA ACGTTCAATGTGTGATGACTTGTCAACTAATCTATCCCAAAATGGCATTTCATGTGCTGCTTATCATGCAGGATTGAATA ATAAAATGCGAACTTCGGTGTTGGATGATTGGATATCTTCCAAGATAAAAGTTGTTGTTGCTACTGTTGCTTTTGGAATG GGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAACATTCCCAAGTCAATGGAAGCATTCTATCAAGAGTCAGG CAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTCTGCTGTACTATGGGGTAGATGATCGCAAAAGAATGGAATTTATAT TACGTAAATCAGTGAGCAAGAAGTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATGTCCCTGATTGCTTTCAAT CTGATGGTTGAATATTGTGAAGGGTCTGGATGTCGCAGGAAAAGGGTTCTCGAGAGTTTTGGGGAACAGGTAACTGCATC ACTATGTGGAAAAACATGTGATGGCTGCAGACATCCAAACTTAGTTGCCCGATATTTGGAGGATCTCACAACTGCTTGTG CTCTACGCCAGAAAAATGGTTCTTCTCGAGTTTTTATGACCAGTTCCACTGATGCAATTAACGGAGAACAGTTATCTGAA TTCTGGAATCAGGATGAGGAAGCTAGTGGATCAGAGGAAGATATATCTGATTCAGATGATGGTAATGAGGTTGTCAACAA CCTAACCCGGTCAAAGCTTCAATCCAAATTGGGAGTGAGTGAAAAGCTTGCTATGTTACAACGGGCAGAAGAAAACTTCT ATCGAAATAATAATGCTTACAAACAGAGCAACAAAGTTGACAAAAATGCTATTTCTGATCCAATGCGAGGATCAAGCAGG CAAAGGTTACAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGAAATGGAAACATCAGCATCTTT CCTTGAAGAAGAATGCTACAAGAAATATGGCAAGGTTGGTAAATCATTCTATTATTCGCAAGTGGCAAGTACTGTAAGAT GGCTGACAACTGCAAGTTCTAGCGAACTGATCAACCGACTTAGTGCAATTAATGCTTCTACCTCAATGAATGTCTTGTCT GAAGCTGAAAACCTCCTCATCCCAGCTAATCAGCCCCTCACACCAGCTGAACAGCCCCTCACATCGCCACCTGCTTTAGA TCCTTATGCAAGAGATACCAGCAATGAACACTCAGGCACTGCTAGATCAGAAACTTCTGCATGTGTCTTGCCAATGGAAG GTTCTTTTAGTACCAATTTGCCACAGATACCATCCTTCTCTGAATTCGTAAATAGTAGGAAAGCAAAAGGGGACCAATTA CATGACACCAAAAGGCATTCATCAAGAGTTGAAAAGAAGATGAGGATACAGTAG |