Microexon ID Zm_3:170273227-170273230:+
Species Zea mays
Coordinates 3:170273227..170273230
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Zm_3:170273227-170273230:+ does not have available information here.
Zm_3:170273227-170273230:+ does not have available information here.
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq TCCAAATCTGGAACATGCTTCAGCGGCAAGGGACTCTTCTGGGCTCACGAGTGGGAGAAACATGGAACCTGCTCTGCCCCTGTGGTTCAGGATGAATTACAGTATTTC
Microexon-tag Amino Acid seq SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYF
Transcript ID Zm.15600.1
Gene ID Zm.15600
Gene Name NA
Pfam domain motif Ribonuclease_T2
Motif E-value 6.1e-46
Motif start 39
Motif end 225
Protein seq >Zm.15600.1
MTMATKAACVLAVWVLVASGLSDLGSARAPLGSKPQREFDYFALSLQWPGTICASTRHCCATNGCCRSEPLQTFTIHGLW
PDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYCSKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDL
YFKYNVTEMLSSGWIQVSNGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCLTTSLANGSVSKSKH
CPRYITLPTYDPLVLANSTVEIMTQFDEFEVPAALYTA*
CDS seq >Zm.15600.1
ATGACGATGGCGACGAAGGCGGCGTGCGTGCTGGCGGTGTGGGTGCTCGTCGCATCGGGCCTGTCCGACCTGGGCTCAGC
GCGCGCGCCCCTGGGCAGCAAGCCGCAGCGGGAGTTCGACTACTTCGCGCTCTCCCTCCAGTGGCCCGGCACCATCTGCG
CCTCCACCCGCCACTGCTGCGCCACCAACGGCTGCTGCCGCTCGGAGCCTCTCCAGACGTTCACGATCCACGGGCTATGG
CCGGACTACGACGACGGGACCTGGCCGTCGTGCTGCCGCCGCACCCAATTCGAGATGGACAAGATATTGCCACTGAAGGA
GGTGCTTGACAAGTACTGGCCGTCCCTCTACTGCTCCAAATCTGGAACATGCTTCAGCGGCAAGGGACTCTTCTGGGCTC
ACGAGTGGGAGAAACATGGAACCTGCTCTGCCCCTGTGGTTCAGGATGAATTACAGTATTTCACCCTTGCCCTTGACCTC
TACTTCAAGTATAACGTTACGGAAATGCTGTCAAGTGGATGGATACAGGTTTCAAATGGTAAGGAATATGCACTGAGCGA
TGTCATCGATACCATCAAACATGCTTTTGGGGGATCACCACAAATTGTTTGCAAGAGGGGTTCAATCGAAGAACTTAGGT
TATGCTTCGACAAAGAATTGAAGCCTCGTGATTGCCTTACCACTTCTTTGGCGAATGGAAGTGTATCAAAAAGCAAGCAC
TGCCCGCGGTACATCACCTTGCCAACGTATGATCCCCTTGTGCTTGCCAATTCAACTGTAGAGATCATGACACAGTTCGA
TGAATTTGAGGTGCCTGCAGCTCTTTATACAGCCTAA