
Microexon ID | Ta_3D:507487427-507487430:+ |
Species | Triticum Aestivum | Coordinates | 3D:507487427..507487430 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | TCGTCCTCTTCCACTTGTTTCAGTGGCAGGGGGGCCTTCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGGCCCCTGTTGTTCATGAAGAATTACAGTACTTC |
Microexon-tag Amino Acid Seq | SSSSTCFSGRGAFWAHEWEKHGTCSAPVVHEELQYF |
Microexon-tag spanning region | 507487225-507487619 |
Microexon-tag prediction score | 0.9464 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3D02G392300.1x |
Reference Transcript ID | TraesCS3D02G392300.1 |
Gene ID | TraesCS3D02G392300 |
Gene Name | NA |
Transcript ID | TraesCS3D02G392300.1 |
Protein ID | |
Gene ID | TraesCS3D02G392300 |
Gene Name | |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 1.60E-48 |
Motif start | 44 |
Motif end | 230 |
Protein seq | >TraesCS3D02G392300.1 MATATATTACLLAVWSLVAAGLFGTGLARSSVAPAAVGKEQREFDYFALALQWPGTICSSTRHCCAVNGCCRSEALHTFT IHGLWPDYDDGTWPSCCRHTSFDMDKLTPLKPALDKYWPSLYCSSSSTCFSGRGAFWAHEWEKHGTCSAPVVHEELQYFT AAIDLYLKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSVEELRLCFTKDLKPRDCLTTSAMYKNL SKSKHCPKKISLPTYDPIVLTNSTLEIVPEASDNGLYFYTS* |
CDS seq | >TraesCS3D02G392300.1 ATGGCGACGGCGACGGCGACGACGGCGTGCCTGCTGGCGGTCTGGTCGCTGGTCGCCGCCGGTCTGTTCGGCACGGGCCT CGCCCGGTCGTCCGTGGCCCCGGCCGCCGTCGGGAAGGAGCAGCGCGAGTTCGACTACTTCGCGCTGGCGCTGCAGTGGC CGGGCACCATCTGCTCCTCCACCCGCCACTGCTGCGCCGTCAACGGCTGCTGCCGGTCGGAGGCACTCCACACGTTCACG ATCCACGGGCTGTGGCCGGACTACGATGACGGGACCTGGCCGTCGTGCTGCCGCCACACCAGCTTCGACATGGACAAGCT AACGCCCCTGAAGCCCGCTCTGGACAAATACTGGCCGTCCCTCTACTGTTCGTCCTCTTCCACTTGTTTCAGTGGCAGGG GGGCCTTCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGGCCCCTGTTGTTCATGAAGAATTACAGTACTTCACC GCCGCCATTGATCTCTACCTCAAATATAACGTCACGGAAATGCTGGCGACTGGAGATATCCTGGTCTCCAACGGTAAAGA ATATGCACTGAGTGATGTCATTGATACCATCAAACATGCTTTTGGGGGCTCACCGCAGATCATATGCAAGAAGGGCTCAG TTGAAGAACTAAGGTTATGCTTCACCAAGGATTTGAAGCCTCGTGATTGCCTGACTACTTCGGCAATGTACAAGAACCTA TCGAAATCAAAGCATTGCCCTAAAAAAATCTCCCTGCCAACATATGATCCCATCGTACTCACAAATTCGACACTGGAGAT TGTCCCAGAAGCCAGCGACAATGGGTTGTACTTCTATACATCCTAA |
Ta_3D:507487427-507487430:+ does not have available information here.