Microexon ID Ta_3D:507487427-507487430:+
Species Triticum   Aestivum
Coordinates 3D:507487427..507487430
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq TCGTCCTCTTCCACTTGTTTCAGTGGCAGGGGGGCCTTCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGGCCCCTGTTGTTCATGAAGAATTACAGTACTTC
Microexon-tag Amino Acid Seq SSSSTCFSGRGAFWAHEWEKHGTCSAPVVHEELQYF
Microexon-tag spanning region507487225-507487619
Microexon-tag prediction score0.9464
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS3D02G392300.1x
Reference Transcript ID TraesCS3D02G392300.1
Gene ID TraesCS3D02G392300
Gene Name NA
Transcript ID TraesCS3D02G392300.1
Protein ID
Gene ID TraesCS3D02G392300
Gene Name
Pfam domain motif Ribonuclease_T2
Motif E-value 1.60E-48
Motif start 44
Motif end 230
Protein seq >TraesCS3D02G392300.1
MATATATTACLLAVWSLVAAGLFGTGLARSSVAPAAVGKEQREFDYFALALQWPGTICSSTRHCCAVNGCCRSEALHTFT
IHGLWPDYDDGTWPSCCRHTSFDMDKLTPLKPALDKYWPSLYCSSSSTCFSGRGAFWAHEWEKHGTCSAPVVHEELQYFT
AAIDLYLKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSVEELRLCFTKDLKPRDCLTTSAMYKNL
SKSKHCPKKISLPTYDPIVLTNSTLEIVPEASDNGLYFYTS*
CDS seq >TraesCS3D02G392300.1
ATGGCGACGGCGACGGCGACGACGGCGTGCCTGCTGGCGGTCTGGTCGCTGGTCGCCGCCGGTCTGTTCGGCACGGGCCT
CGCCCGGTCGTCCGTGGCCCCGGCCGCCGTCGGGAAGGAGCAGCGCGAGTTCGACTACTTCGCGCTGGCGCTGCAGTGGC
CGGGCACCATCTGCTCCTCCACCCGCCACTGCTGCGCCGTCAACGGCTGCTGCCGGTCGGAGGCACTCCACACGTTCACG
ATCCACGGGCTGTGGCCGGACTACGATGACGGGACCTGGCCGTCGTGCTGCCGCCACACCAGCTTCGACATGGACAAGCT
AACGCCCCTGAAGCCCGCTCTGGACAAATACTGGCCGTCCCTCTACTGTTCGTCCTCTTCCACTTGTTTCAGTGGCAGGG
GGGCCTTCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGGCCCCTGTTGTTCATGAAGAATTACAGTACTTCACC
GCCGCCATTGATCTCTACCTCAAATATAACGTCACGGAAATGCTGGCGACTGGAGATATCCTGGTCTCCAACGGTAAAGA
ATATGCACTGAGTGATGTCATTGATACCATCAAACATGCTTTTGGGGGCTCACCGCAGATCATATGCAAGAAGGGCTCAG
TTGAAGAACTAAGGTTATGCTTCACCAAGGATTTGAAGCCTCGTGATTGCCTGACTACTTCGGCAATGTACAAGAACCTA
TCGAAATCAAAGCATTGCCCTAAAAAAATCTCCCTGCCAACATATGATCCCATCGTACTCACAAATTCGACACTGGAGAT
TGTCCCAGAAGCCAGCGACAATGGGTTGTACTTCTATACATCCTAA
Ta_3D:507487427-507487430:+ does not have available information here.