Microexon ID Ta_3D:507447445-507447448:+
Species Triticum   Aestivum
Coordinates 3D:507447445..507447448
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGGG
Microexon Amino Acid seq WA
Microexon-tag DNA Seq GGCGACACCTCCACCTGCTTCGGCGGAAGAGGCCCCTTCTGGGCCCACGAGTGGGCGACTCATGGGACGTGCGGCTACCCTGAGATACAGGACGAGTACGACTACTTC
Microexon-tag Amino Acid Seq GDTSTCFGGRGPFWAHEWATHGTCGYPEIQDEYDYF
Microexon-tag spanning region507447224-507447610
Microexon-tag prediction score0.9158
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS3D02G392200.1x
Reference Transcript ID TraesCS3D02G392200.1
Gene ID TraesCS3D02G392200
Gene Name NA
Transcript ID TraesCS3D02G392200.1
Protein ID
Gene ID TraesCS3D02G392200
Gene Name
Pfam domain motif Ribonuclease_T2
Motif E-value 2.00E-46
Motif start 42
Motif end 229
Protein seq >TraesCS3D02G392200.1
MDRTRRGRRLLVSLCFLCLAVLLPGALLASPAAGRKRRQAGFDHYVLALQWPGTVCRQTNHCCSSNGCCRSNPLNWFTIH
GLWPQYSYGGWPSCCRPTTTFNMNKIAMLKPILEKYWPSLYCGDTSTCFGGRGPFWAHEWATHGTCGYPEIQDEYDYFST
ALYLYSKYNVTKALRKAHIYPRNGRKYAVAHIVDAIDHAFGRLPHLVCKNGSVQELRLCFHKDYQPRDCGSEDDEAWSSS
RRSHCPRYVTLPQSGTYQQSLVSLGVLHLITKNADTELLSLKS*
CDS seq >TraesCS3D02G392200.1
ATGGACAGGACGAGGCGCGGGAGGCGGCTCCTCGTGTCGCTCTGCTTCCTCTGCCTGGCCGTGCTGCTCCCCGGCGCGCT
GCTGGCGTCGCCGGCGGCCGGGAGGAAGCGGCGGCAGGCCGGGTTCGACCACTACGTGCTGGCGCTGCAGTGGCCCGGCA
CCGTCTGCCGCCAGACCAACCACTGCTGCAGCTCCAACGGCTGCTGCCGATCAAACCCTCTCAACTGGTTCACAATCCAT
GGGCTGTGGCCGCAGTACAGCTACGGTGGGTGGCCGTCGTGCTGCAGGCCAACCACCACATTCAACATGAACAAGATCGC
GATGCTGAAGCCGATACTGGAGAAGTACTGGCCGTCGCTCTACTGCGGCGACACCTCCACCTGCTTCGGCGGAAGAGGCC
CCTTCTGGGCCCACGAGTGGGCGACTCATGGGACGTGCGGCTACCCTGAGATACAGGACGAGTACGACTACTTCTCCACG
GCGCTCTACCTCTACAGCAAGTACAATGTCACGAAAGCTCTGCGGAAAGCACACATCTACCCGCGGAACGGCCGCAAGTA
CGCGGTGGCGCACATCGTGGACGCCATCGACCACGCCTTCGGGCGGCTGCCGCACCTCGTCTGCAAGAACGGCTCCGTGC
AGGAGCTCAGGCTCTGCTTCCACAAGGACTACCAGCCCCGTGACTGCGGGTCGGAGGACGACGAGGCGTGGTCGTCGAGC
AGGAGAAGCCATTGCCCTCGCTACGTCACCCTCCCACAGTCTGGTACGTATCAACAATCGCTTGTTTCCTTGGGAGTACT
GCACCTAATTACTAAAAACGCAGATACAGAGCTTCTCAGCCTAAAGAGTTAA
Ta_3D:507447445-507447448:+ does not have available information here.