
Microexon ID | Ta_3B:669712007-669712010:+ |
Species | Triticum Aestivum | Coordinates | 3B:669712007..669712010 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | TCGACCTCTTCCACTTGCTTCAGTGGCAGGGGCCCCTTCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGTCCCCTGTTGTTCATGAAGAATTACAGTACTTC |
Microexon-tag Amino Acid Seq | STSSTCFSGRGPFWAHEWEKHGTCSSPVVHEELQYF |
Microexon-tag spanning region | 669711792-669712202 |
Microexon-tag prediction score | 0.9538 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3B02G430300.1x |
Reference Transcript ID | TraesCS3B02G430300.1 |
Gene ID | TraesCS3B02G430300 |
Gene Name | NA |
Transcript ID | TraesCS3B02G430300.1 |
Protein ID | |
Gene ID | TraesCS3B02G430300 |
Gene Name | |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 1.10E-48 |
Motif start | 42 |
Motif end | 228 |
Protein seq | >TraesCS3B02G430300.1 MATATATCLLAVWALVAAGLFGTGLARASVAPAAVGKEQREFDYFALALQWPGTICSSTRHCCAVNGCCRSEALHTFTIH GLWPDYDDGTWPSCCRHTSFDMDKITPLKPTLDKYWPSLYCSTSSTCFSGRGPFWAHEWEKHGTCSSPVVHEELQYFTTA IDLYLKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSVEELRLCFTKDLKPRDCLTTSAMYKNLSK SKHCPRKISLPTYDPIVLTNSTLEIVPEASDNGLYFFTS* |
CDS seq | >TraesCS3B02G430300.1 ATGGCGACGGCGACGGCGACGTGCCTGCTGGCGGTCTGGGCGCTGGTCGCCGCCGGCCTGTTCGGCACGGGCCTCGCCCG GGCGTCCGTGGCCCCGGCCGCCGTCGGGAAGGAGCAGCGCGAGTTCGACTACTTCGCGCTGGCGCTGCAGTGGCCGGGCA CCATCTGCTCCTCCACCCGCCACTGCTGCGCCGTCAACGGCTGCTGCCGGTCGGAGGCGCTCCACACCTTCACGATCCAC GGGCTGTGGCCGGACTACGATGACGGGACCTGGCCGTCGTGCTGCCGCCACACCAGCTTCGACATGGACAAGATAACGCC TCTGAAGCCCACTCTGGACAAGTACTGGCCGTCCCTCTACTGTTCGACCTCTTCCACTTGCTTCAGTGGCAGGGGCCCCT TCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGTCCCCTGTTGTTCATGAAGAATTACAGTACTTCACCACCGCC ATTGATCTCTACCTCAAATATAATGTTACAGAAATGCTGGCGACTGGAGATATCCTGGTCTCCAACGGTAAAGAATATGC ACTGAGTGATGTCATTGATACCATCAAGCATGCTTTTGGGGGCTCACCGCAGATCATATGCAAGAAGGGCTCAGTTGAAG AACTAAGATTATGCTTCACCAAGGATTTGAAGCCTCGCGATTGCCTTACTACTTCGGCAATGTACAAGAACCTATCGAAA TCAAAGCATTGCCCTCGAAAAATCTCCCTGCCAACATATGATCCCATCGTACTCACAAATTCGACACTGGAGATTGTCCC AGAAGCCAGCGACAACGGGTTGTACTTCTTTACATCCTAA |
Ta_3B:669712007-669712010:+ does not have available information here.