
Microexon ID | Ta_3B:669634074-669634077:+ |
Species | Triticum Aestivum | Coordinates | 3B:669634074..669634077 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WA |
Microexon-tag DNA Seq | GGCGACACCTCCACCTGCTTCGGCGGAAGAGGCCCCTTCTGGGCCCACGAGTGGGCGGCTCACGGGACGTGTGGGTACCCTGAGATACAGGACGAGTACGACTACTTC |
Microexon-tag Amino Acid Seq | GDTSTCFGGRGPFWAHEWAAHGTCGYPEIQDEYDYF |
Microexon-tag spanning region | 669633862-669634234 |
Microexon-tag prediction score | 0.9016 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3B02G430200.1x |
Reference Transcript ID | TraesCS3B02G430200.1 |
Gene ID | TraesCS3B02G430200 |
Gene Name | NA |
Transcript ID | TraesCS3B02G430200.1 |
Protein ID | |
Gene ID | TraesCS3B02G430200 |
Gene Name | |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 1.10E-46 |
Motif start | 42 |
Motif end | 229 |
Protein seq | >TraesCS3B02G430200.1 MDGTRRGRRLLLSLCFLCLAVLPPGALLASPAAGRKRRQGGFDHYVLALQWPGTVCRQTNHCCSSNGCCRSNPLNWFTIH GLWPQYSYGGWPSCCRPTTTFNMNKIAMLRPILEKYWPSLYCGDTSTCFGGRGPFWAHEWAAHGTCGYPEIQDEYDYFST ALYLYSKYNVTKALRKAHIYPRNGRKYAVAHIVDAIDHAFGRLPHLVCKNGSVQEVRLCFHKDYQPRDCGSEDDEAWSSS TRSHCPRYVTLPSYKQSALGNATEARLRNRAENAPLAHGQSYV* |
CDS seq | >TraesCS3B02G430200.1 ATGGACGGGACGAGGCGCGGGAGGCGGCTCCTGCTGTCGCTCTGCTTCCTCTGCCTGGCCGTGCTGCCCCCCGGCGCGCT GCTGGCATCGCCGGCGGCCGGGAGGAAGCGGCGGCAGGGCGGGTTCGACCACTACGTGCTGGCCCTGCAGTGGCCGGGCA CCGTCTGCCGCCAGACCAACCACTGCTGCAGCTCCAACGGCTGCTGCCGATCAAACCCTCTCAACTGGTTCACAATCCAT GGGCTTTGGCCGCAGTACAGCTACGGTGGGTGGCCGTCGTGCTGCAGACCAACCACCACATTCAACATGAACAAGATCGC GATGCTGAGGCCGATCCTGGAGAAGTACTGGCCGTCGCTCTACTGCGGCGACACCTCCACCTGCTTCGGCGGAAGAGGCC CCTTCTGGGCCCACGAGTGGGCGGCTCACGGGACGTGTGGGTACCCTGAGATACAGGACGAGTACGACTACTTCTCCACG GCGCTCTACCTCTACAGCAAGTACAATGTCACGAAAGCGCTGAGGAAAGCGCACATCTACCCGCGGAACGGCCGCAAGTA CGCGGTGGCGCACATCGTGGACGCCATCGACCACGCCTTCGGCCGGCTGCCGCACCTCGTCTGCAAGAACGGCTCCGTGC AGGAGGTCAGGCTCTGCTTCCACAAGGACTACCAGCCCAGGGATTGCGGGTCGGAGGACGACGAGGCGTGGTCGTCTAGC ACGAGAAGCCACTGCCCTCGCTACGTCACCCTCCCATCCTACAAACAGTCCGCGTTGGGGAACGCCACGGAGGCGCGCCT GCGGAACCGAGCGGAGAACGCGCCGCTCGCACACGGGCAGAGCTACGTGTAG |
Ta_3B:669634074-669634077:+ does not have available information here.