
Microexon ID | Ta_3A:645543840-645543843:+ |
Species | Triticum Aestivum | Coordinates | 3A:645543840..645543843 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | TCGACCTCTTCCACCTGCTTCAGTGGCAGGGGCCCCTTCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGGCCCCTGTTGTTCATGAAGAATTACAGTACTTC |
Microexon-tag Amino Acid Seq | STSSTCFSGRGPFWAHEWEKHGTCSAPVVHEELQYF |
Microexon-tag spanning region | 645543637-645544032 |
Microexon-tag prediction score | 0.951 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3A02G398300.1x |
Reference Transcript ID | TraesCS3A02G398300.1 |
Gene ID | TraesCS3A02G398300 |
Gene Name | NA |
Transcript ID | TraesCS3A02G398300.1 |
Protein ID | |
Gene ID | TraesCS3A02G398300 |
Gene Name | |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 8.60E-49 |
Motif start | 44 |
Motif end | 230 |
Protein seq | >TraesCS3A02G398300.1 MATATATATCLLAVWALVAAGLFGTGLARASVAPAAVGKEQREFDYFALALQWPGTICSSTRHCCAVNGCCRSEALHTFT IHGLWPDYDDGTWPSCCRHTSFDMDKLTPLKPTLDKYWPSLYCSTSSTCFSGRGPFWAHEWEKHGTCSAPVVHEELQYFT TALDLYYKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSVEELRLCFTKDLKPRDCLTTSAMYKNL SKSKHCPKKISLPTYDPIGKF* |
CDS seq | >TraesCS3A02G398300.1 ATGGCGACGGCGACGGCGACGGCGACGTGCCTGCTGGCGGTCTGGGCGCTGGTCGCCGCCGGCCTGTTCGGCACGGGCCT CGCCCGGGCGTCCGTGGCCCCGGCCGCGGTGGGGAAGGAGCAGCGCGAGTTCGACTACTTCGCGCTGGCGCTGCAGTGGC CAGGCACCATCTGCTCCTCCACCCGCCACTGCTGCGCCGTCAACGGCTGCTGCCGGTCGGAGGCGCTCCACACCTTCACG ATCCACGGGCTGTGGCCGGACTACGATGACGGGACCTGGCCGTCGTGCTGCCGCCACACCAGCTTCGACATGGACAAGTT AACGCCTCTGAAGCCCACTCTGGACAAATACTGGCCGTCCCTCTACTGTTCGACCTCTTCCACCTGCTTCAGTGGCAGGG GCCCCTTCTGGGCTCATGAGTGGGAGAAGCATGGAACATGCTCGGCCCCTGTTGTTCATGAAGAATTACAGTACTTCACC ACCGCCCTTGATCTCTACTACAAATATAACGTTACAGAAATGCTGGCGACTGGAGATATCCTGGTCTCCAACGGTAAAGA ATATGCACTGAGTGATGTCATTGATACCATCAAGCATGCTTTTGGGGGCTCACCGCAGATCATATGCAAGAAGGGCTCAG TTGAAGAACTAAGGTTATGCTTCACCAAGGATTTGAAGCCTCGCGATTGCCTTACTACTTCGGCAATGTACAAGAACCTA TCGAAGTCGAAGCATTGCCCTAAAAAAATCTCCCTGCCAACATATGATCCCATCGGTAAGTTTTAA |
Ta_3A:645543840-645543843:+ does not have available information here.