
Microexon ID | Ta_3A:645405116-645405119:+ |
Species | Triticum Aestivum | Coordinates | 3A:645405116..645405119 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WA |
Microexon-tag DNA Seq | GGCGACACCTCCACCTGCTTCGGCGGGAGAGGCCCCTTCTGGGCCCACGAGTGGGCGACTCATGGAACGTGTGGCTACCCGGAGATACAGGACGAGTACGACTACTTC |
Microexon-tag Amino Acid Seq | GDTSTCFGGRGPFWAHEWATHGTCGYPEIQDEYDYF |
Microexon-tag spanning region | 645404920-645405295 |
Microexon-tag prediction score | 0.9095 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3A02G398200.1x |
Reference Transcript ID | TraesCS3A02G398200.1 |
Gene ID | TraesCS3A02G398200 |
Gene Name | NA |
Transcript ID | TraesCS3A02G398200.1 |
Protein ID | |
Gene ID | TraesCS3A02G398200 |
Gene Name | |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 1.80E-46 |
Motif start | 42 |
Motif end | 229 |
Protein seq | >TraesCS3A02G398200.1 MDGTRRGRRLLVSLCFLCLAVLLPGALLASPAAGRKRRQAGFDHYVLALQWPGTVCRQTNHCCSSNGCCRSNPLNWFTIH GLWPQYSYGGWPSCCRPTTTFNMNKIAMLRPILEKYWPSLYCGDTSTCFGGRGPFWAHEWATHGTCGYPEIQDEYDYFST ALYLYSKYNVTKALRKAQIYPRNGRKYAVAHIVDAIDHAFGRLPHLVCKNGSVQELRLCFHKDYQPRDCGSEDDEASSYS RRSHCPRYVTLPSYKQSASGNATEGRLRNPAENQPRVHGQSYL* |
CDS seq | >TraesCS3A02G398200.1 ATGGACGGGACGAGGCGCGGGAGGCGGCTCCTCGTGTCGCTCTGCTTCCTCTGCCTGGCCGTGCTGCTCCCCGGCGCGCT GCTGGCGTCGCCGGCGGCCGGGAGGAAGCGGCGGCAGGCCGGGTTCGACCACTACGTGCTGGCCCTGCAGTGGCCCGGCA CCGTCTGCCGCCAGACCAACCACTGCTGCAGCTCCAACGGCTGCTGCCGATCAAACCCTCTCAACTGGTTCACGATCCAT GGGCTGTGGCCGCAGTACAGCTACGGTGGGTGGCCGTCGTGCTGCAGGCCAACCACCACGTTCAACATGAACAAGATCGC GATGCTGAGGCCGATCCTGGAGAAGTACTGGCCGTCGCTCTACTGCGGCGACACCTCCACCTGCTTCGGCGGGAGAGGCC CCTTCTGGGCCCACGAGTGGGCGACTCATGGAACGTGTGGCTACCCGGAGATACAGGACGAGTACGACTACTTCTCCACG GCGCTCTACCTCTACAGCAAGTACAACGTCACGAAAGCTCTGCGGAAAGCGCAGATCTACCCGCGGAACGGCCGCAAGTA CGCGGTGGCGCACATCGTGGACGCCATTGACCACGCCTTCGGCCGGCTGCCGCACCTCGTCTGCAAGAACGGCTCCGTGC AGGAGCTCAGGCTCTGCTTCCACAAGGACTACCAGCCCCGGGATTGCGGGTCGGAGGACGACGAGGCGTCGTCCTACAGC AGGAGAAGCCATTGCCCTCGCTACGTCACCCTCCCATCCTACAAACAGTCTGCGTCGGGGAACGCCACGGAGGGCCGCCT GCGGAACCCAGCGGAGAATCAGCCGCGCGTACACGGGCAGAGCTACCTATAA |
Ta_3A:645405116-645405119:+ does not have available information here.