
Microexon ID | Ps_NC_039358.1:228293342-228293345:- |
Species | Papaver somniferum | Coordinates | NC_039358.1:228293342..228293345 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | GGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCTGGGCCCATGAGTGGGAAAAGCATGGCACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTC |
Microexon-tag Amino Acid Seq | GKPSTCSGGRGLFWAHEWEKHGTCSSPVVHDEYQYF |
Microexon-tag spanning region | 228293104-228293529 |
Microexon-tag prediction score | 0.9613 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026566295.1x |
Reference Transcript ID | XM_026566295.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026566295.1 |
Protein ID | XP_026422080.1 |
Gene ID | LOC113318165 |
Gene Name | NA |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 1.3e-49 |
Motif start | 40 |
Motif end | 227 |
Protein seq | >XP_026422080.1 MAFPKTLFVSVLLIVVSSCLFVEIDGRSRSRSLLSEQREFDYFALSLQWPGTICQHTRHCCAGNGCCRSDNGPTEFTIHG LWPDYNDGTWPACCTETRFDEKLISSLRKDLDKYWPSLSCGKPSTCSGGRGLFWAHEWEKHGTCSSPVVHDEYQYFTTTL SVYFKYNVTAILAAEGYVPSNSEKYPLGGIVSAVQNAFGATPQVVCSHGAIEELRLCFYKDFKPRDCIMNEKHRSCPKYV SMPERRPMGHESSLPWSLDSEVFSS* |
CDS seq | >XM_026566295.1 ATGGCTTTCCCTAAAACTCTTTTTGTCTCTGTTCTCTTGATTGTGGTGAGTTCTTGTTTGTTTGTCGAAATTGATGGTAG AAGTAGAAGCAGAAGTTTATTGAGTGAACAAAGAGAGTTTGATTACTTCGCTTTATCTCTTCAATGGCCTGGTACTATTT GTCAACATACTAGACATTGCTGTGCTGGTAATGGTTGTTGCAGAAGTGATAATGGACCAACGGAGTTCACAATCCATGGA CTCTGGCCCGACTACAATGATGGAACCTGGCCAGCATGTTGCACCGAAACTAGATTTGATGAGAAATTGATCTCATCATT GCGCAAAGATCTTGACAAGTATTGGCCGTCCTTAAGCTGTGGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCT GGGCCCATGAGTGGGAAAAGCATGGCACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTCACAACGACTCTC AGTGTTTACTTCAAGTATAATGTCACGGCAATTTTGGCTGCCGAAGGATATGTACCCTCAAATTCTGAGAAATATCCCTT GGGAGGCATTGTTTCAGCCGTTCAAAATGCTTTTGGAGCAACCCCCCAGGTGGTTTGCTCACATGGTGCCATAGAGGAGC TTCGCTTATGCTTTTACAAAGATTTCAAGCCTCGCGACTGTATAATGAATGAAAAGCACAGGTCATGCCCGAAATACGTG AGCATGCCAGAACGCAGGCCGATGGGACATGAGTCTTCACTTCCATGGTCACTTGATAGTGAAGTATTCTCATCCTGA |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | GGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCTGGGCCCATGAGTGGGAAAAGCATGGCACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTC |
Microexon-tag Amino Acid seq | GKPSTCSGGRGLFWAHEWEKHGTCSSPVVHDEYQYF |
Transcript ID | Ps.7202.2 |
Gene ID | Ps.7202 |
Gene Name | NA |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 6.1e-39 |
Motif start | 12 |
Motif end | 165 |
Protein seq | >Ps.7202.2 MVVAEVIMDQRSSQSVNGLWPDYNDGTWPACCTETRFDEKLISSLRKDLDKYWPSLSCGKPSTCSGGRGLFWAHEWEKHG TCSSPVVHDEYQYFTTTLSVYFKYNVTAILAAEGYVPSNSEKYPLGGIVSAVQNAFGATPQVVCSHGAIEELRLCFYKDF KPRDCIMNEKHRSCPKYVSMPERRPMGKFSRFIISSLLLGNYVNPYLGFYSVQGKSCLFISCINKGSYLMISKPSLLCRC GYIIRCYFVEHDTSRDHI* |
CDS seq | >Ps.7202.2 ATGGTTGTTGCAGAAGTGATAATGGACCAACGGAGTTCACAATCCGTAAATGGACTCTGGCCCGACTACAATGATGGAAC CTGGCCAGCATGTTGCACCGAAACTAGATTTGATGAGAAATTGATCTCATCATTGCGCAAAGATCTTGACAAGTATTGGC CGTCCTTAAGCTGTGGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCTGGGCCCATGAGTGGGAAAAGCATGGC ACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTCACAACGACTCTCAGTGTTTACTTCAAGTATAATGTCAC GGCAATTTTGGCTGCCGAAGGATATGTACCCTCAAATTCTGAGAAATATCCCTTGGGAGGCATTGTTTCAGCCGTTCAAA ATGCTTTTGGAGCAACCCCCCAGGTGGTTTGCTCACATGGTGCCATAGAGGAGCTTCGCTTATGCTTTTACAAAGATTTC AAGCCTCGCGACTGTATAATGAATGAAAAGCACAGGTCATGCCCGAAATACGTGAGCATGCCAGAACGCAGGCCGATGGG TAAGTTTTCTAGATTCATCATTTCCTCTTTATTATTGGGTAATTACGTAAACCCCTATTTAGGTTTTTACAGTGTTCAAG GGAAAAGTTGCCTTTTCATTTCTTGCATTAATAAGGGTAGTTATTTGATGATTAGTAAACCTTCATTATTGTGCCGATGT GGCTACATAATACGGTGTTACTTTGTAGAACACGATACAAGTAGAGACCATATATGA |