Microexon ID Ps_NC_039358.1:228293342-228293345:-
Species Papaver somniferum
Coordinates NC_039358.1:228293342..228293345
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq GGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCTGGGCCCATGAGTGGGAAAAGCATGGCACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTC
Microexon-tag Amino Acid Seq GKPSTCSGGRGLFWAHEWEKHGTCSSPVVHDEYQYF
Microexon-tag spanning region228293104-228293529
Microexon-tag prediction score0.9613
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026566295.1x
Reference Transcript ID XM_026566295.1
Gene ID NA
Gene Name NA
Transcript ID XM_026566295.1
Protein ID XP_026422080.1
Gene ID LOC113318165
Gene Name NA
Pfam domain motif Ribonuclease_T2
Motif E-value 1.3e-49
Motif start 40
Motif end 227
Protein seq >XP_026422080.1
MAFPKTLFVSVLLIVVSSCLFVEIDGRSRSRSLLSEQREFDYFALSLQWPGTICQHTRHCCAGNGCCRSDNGPTEFTIHG
LWPDYNDGTWPACCTETRFDEKLISSLRKDLDKYWPSLSCGKPSTCSGGRGLFWAHEWEKHGTCSSPVVHDEYQYFTTTL
SVYFKYNVTAILAAEGYVPSNSEKYPLGGIVSAVQNAFGATPQVVCSHGAIEELRLCFYKDFKPRDCIMNEKHRSCPKYV
SMPERRPMGHESSLPWSLDSEVFSS*
CDS seq >XM_026566295.1
ATGGCTTTCCCTAAAACTCTTTTTGTCTCTGTTCTCTTGATTGTGGTGAGTTCTTGTTTGTTTGTCGAAATTGATGGTAG
AAGTAGAAGCAGAAGTTTATTGAGTGAACAAAGAGAGTTTGATTACTTCGCTTTATCTCTTCAATGGCCTGGTACTATTT
GTCAACATACTAGACATTGCTGTGCTGGTAATGGTTGTTGCAGAAGTGATAATGGACCAACGGAGTTCACAATCCATGGA
CTCTGGCCCGACTACAATGATGGAACCTGGCCAGCATGTTGCACCGAAACTAGATTTGATGAGAAATTGATCTCATCATT
GCGCAAAGATCTTGACAAGTATTGGCCGTCCTTAAGCTGTGGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCT
GGGCCCATGAGTGGGAAAAGCATGGCACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTCACAACGACTCTC
AGTGTTTACTTCAAGTATAATGTCACGGCAATTTTGGCTGCCGAAGGATATGTACCCTCAAATTCTGAGAAATATCCCTT
GGGAGGCATTGTTTCAGCCGTTCAAAATGCTTTTGGAGCAACCCCCCAGGTGGTTTGCTCACATGGTGCCATAGAGGAGC
TTCGCTTATGCTTTTACAAAGATTTCAAGCCTCGCGACTGTATAATGAATGAAAAGCACAGGTCATGCCCGAAATACGTG
AGCATGCCAGAACGCAGGCCGATGGGACATGAGTCTTCACTTCCATGGTCACTTGATAGTGAAGTATTCTCATCCTGA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq GGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCTGGGCCCATGAGTGGGAAAAGCATGGCACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTC
Microexon-tag Amino Acid seq GKPSTCSGGRGLFWAHEWEKHGTCSSPVVHDEYQYF
Transcript ID Ps.7202.2
Gene ID Ps.7202
Gene Name NA
Pfam domain motif Ribonuclease_T2
Motif E-value 6.1e-39
Motif start 12
Motif end 165
Protein seq >Ps.7202.2
MVVAEVIMDQRSSQSVNGLWPDYNDGTWPACCTETRFDEKLISSLRKDLDKYWPSLSCGKPSTCSGGRGLFWAHEWEKHG
TCSSPVVHDEYQYFTTTLSVYFKYNVTAILAAEGYVPSNSEKYPLGGIVSAVQNAFGATPQVVCSHGAIEELRLCFYKDF
KPRDCIMNEKHRSCPKYVSMPERRPMGKFSRFIISSLLLGNYVNPYLGFYSVQGKSCLFISCINKGSYLMISKPSLLCRC
GYIIRCYFVEHDTSRDHI*
CDS seq >Ps.7202.2
ATGGTTGTTGCAGAAGTGATAATGGACCAACGGAGTTCACAATCCGTAAATGGACTCTGGCCCGACTACAATGATGGAAC
CTGGCCAGCATGTTGCACCGAAACTAGATTTGATGAGAAATTGATCTCATCATTGCGCAAAGATCTTGACAAGTATTGGC
CGTCCTTAAGCTGTGGAAAGCCATCGACCTGCAGTGGTGGAAGAGGACTCTTCTGGGCCCATGAGTGGGAAAAGCATGGC
ACATGTTCTTCTCCAGTAGTTCATGATGAATACCAGTACTTCACAACGACTCTCAGTGTTTACTTCAAGTATAATGTCAC
GGCAATTTTGGCTGCCGAAGGATATGTACCCTCAAATTCTGAGAAATATCCCTTGGGAGGCATTGTTTCAGCCGTTCAAA
ATGCTTTTGGAGCAACCCCCCAGGTGGTTTGCTCACATGGTGCCATAGAGGAGCTTCGCTTATGCTTTTACAAAGATTTC
AAGCCTCGCGACTGTATAATGAATGAAAAGCACAGGTCATGCCCGAAATACGTGAGCATGCCAGAACGCAGGCCGATGGG
TAAGTTTTCTAGATTCATCATTTCCTCTTTATTATTGGGTAATTACGTAAACCCCTATTTAGGTTTTTACAGTGTTCAAG
GGAAAAGTTGCCTTTTCATTTCTTGCATTAATAAGGGTAGTTATTTGATGATTAGTAAACCTTCATTATTGTGCCGATGT
GGCTACATAATACGGTGTTACTTTGTAGAACACGATACAAGTAGAGACCATATATGA