Microexon ID Os_1:38996526-38996529:-
Species Oryza sativa
Coordinates 1:38996526..38996529
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Os_1:38996526-38996529:- does not have available information here.
Transcript ID Os01t0897300-01
Protein ID Os01t0897300-01
Gene ID Os01g0897300
Gene Name OsRNS6
Pfam domain motif Ribonuclease_T2
Motif E-value 1.7e-42
Motif start 46
Motif end 232
Protein seq >Os01t0897300-01
MEEKRQRLVISLSALCLAVAVMSGALLPPRASAAGGVGRKRRWAGFDYYVLALQWPGTVCRQTSHCCSSNGCCRSHPLKF
FTIHGLWPQYSYGGWPSCCRPTTFDGNKISRLKTILEEYWPSLYCGSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDY
FSTALYLYSKYNVTKALKKAHIYPRGGRKYLVGHIVSAIEFSFGAMPSIVCKNGSVQELRLCFHKDYQPRDCLVEGENSV
RRNHCPRYVTLPSYKPHAFGNSTEGISNQVNVEHQSYQ*
CDS seq >Os01t0897300-01
ATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGCCGTGATGTCCGGCGCGCTGCT
GCCGCCGCGGGCGTCGGCGGCGGGAGGGGTCGGGAGGAAGCGGCGGTGGGCCGGGTTCGACTACTACGTGCTGGCGCTGC
AGTGGCCGGGCACCGTCTGCCGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGCTCACATCCGCTCAAATTC
TTCACGATCCATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAGGCCAACCACATTCGACGGCAA
CAAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTGGCCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTG
GGAAAAGGCCATTTTGGGTGCATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTAC
TTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGAAAGCTCTGAAGAAAGCACATATTTATCCTAGAGGAGG
CAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGAATTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACG
GCTCAGTTCAAGAACTGAGGCTCTGCTTCCACAAGGATTATCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGTT
AGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACACGCATTTGGCAATTCTACAGAAGGAATCAG
TAACCAAGTCAACGTTGAGCACCAATCATATCAGTAG
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq GGCTCTTTCTCAACCTGCTTTGGTGGGAAAAGGCCATTTTGGGTGCATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTACTTC
Microexon-tag Amino Acid seq GSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDYF
Transcript ID Os01t0897300-01
Gene ID Os.4707
Gene Name OsRNS6
Pfam domain motif Ribonuclease_T2
Motif E-value 1.7e-42
Motif start 46
Motif end 232
Protein seq >Os01t0897300-01
MEEKRQRLVISLSALCLAVAVMSGALLPPRASAAGGVGRKRRWAGFDYYVLALQWPGTVCRQTSHCCSSNGCCRSHPLKF
FTIHGLWPQYSYGGWPSCCRPTTFDGNKISRLKTILEEYWPSLYCGSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDY
FSTALYLYSKYNVTKALKKAHIYPRGGRKYLVGHIVSAIEFSFGAMPSIVCKNGSVQELRLCFHKDYQPRDCLVEGENSV
RRNHCPRYVTLPSYKPHAFGNSTEGISNQVNVEHQSYQ*
CDS seq >Os01t0897300-01
ATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGCCGTGATGTCCGGCGCGCTGCT
GCCGCCGCGGGCGTCGGCGGCGGGAGGGGTCGGGAGGAAGCGGCGGTGGGCCGGGTTCGACTACTACGTGCTGGCGCTGC
AGTGGCCGGGCACCGTCTGCCGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGCTCACATCCGCTCAAATTC
TTCACGATCCATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAGGCCAACCACATTCGACGGCAA
CAAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTGGCCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTG
GGAAAAGGCCATTTTGGGTGCATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTAC
TTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGAAAGCTCTGAAGAAAGCACATATTTATCCTAGAGGAGG
CAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGAATTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACG
GCTCAGTTCAAGAACTGAGGCTCTGCTTCCACAAGGATTATCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGTT
AGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACACGCATTTGGCAATTCTACAGAAGGAATCAG
TAACCAAGTCAACGTTGAGCACCAATCATATCAGTAG