
Microexon ID | Os_1:38996526-38996529:- |
Species | Oryza sativa | Coordinates | 1:38996526..38996529 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Os_1:38996526-38996529:- does not have available information here.
Transcript ID | Os01t0897300-01 |
Protein ID | Os01t0897300-01 |
Gene ID | Os01g0897300 |
Gene Name | OsRNS6 |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 1.7e-42 |
Motif start | 46 |
Motif end | 232 |
Protein seq | >Os01t0897300-01 MEEKRQRLVISLSALCLAVAVMSGALLPPRASAAGGVGRKRRWAGFDYYVLALQWPGTVCRQTSHCCSSNGCCRSHPLKF FTIHGLWPQYSYGGWPSCCRPTTFDGNKISRLKTILEEYWPSLYCGSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDY FSTALYLYSKYNVTKALKKAHIYPRGGRKYLVGHIVSAIEFSFGAMPSIVCKNGSVQELRLCFHKDYQPRDCLVEGENSV RRNHCPRYVTLPSYKPHAFGNSTEGISNQVNVEHQSYQ* |
CDS seq | >Os01t0897300-01 ATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGCCGTGATGTCCGGCGCGCTGCT GCCGCCGCGGGCGTCGGCGGCGGGAGGGGTCGGGAGGAAGCGGCGGTGGGCCGGGTTCGACTACTACGTGCTGGCGCTGC AGTGGCCGGGCACCGTCTGCCGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGCTCACATCCGCTCAAATTC TTCACGATCCATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAGGCCAACCACATTCGACGGCAA CAAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTGGCCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTG GGAAAAGGCCATTTTGGGTGCATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTAC TTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGAAAGCTCTGAAGAAAGCACATATTTATCCTAGAGGAGG CAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGAATTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACG GCTCAGTTCAAGAACTGAGGCTCTGCTTCCACAAGGATTATCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGTT AGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACACGCATTTGGCAATTCTACAGAAGGAATCAG TAACCAAGTCAACGTTGAGCACCAATCATATCAGTAG |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | GGCTCTTTCTCAACCTGCTTTGGTGGGAAAAGGCCATTTTGGGTGCATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTACTTC |
Microexon-tag Amino Acid seq | GSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDYF |
Transcript ID | Os01t0897300-01 |
Gene ID | Os.4707 |
Gene Name | OsRNS6 |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 1.7e-42 |
Motif start | 46 |
Motif end | 232 |
Protein seq | >Os01t0897300-01 MEEKRQRLVISLSALCLAVAVMSGALLPPRASAAGGVGRKRRWAGFDYYVLALQWPGTVCRQTSHCCSSNGCCRSHPLKF FTIHGLWPQYSYGGWPSCCRPTTFDGNKISRLKTILEEYWPSLYCGSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDY FSTALYLYSKYNVTKALKKAHIYPRGGRKYLVGHIVSAIEFSFGAMPSIVCKNGSVQELRLCFHKDYQPRDCLVEGENSV RRNHCPRYVTLPSYKPHAFGNSTEGISNQVNVEHQSYQ* |
CDS seq | >Os01t0897300-01 ATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGCCGTGATGTCCGGCGCGCTGCT GCCGCCGCGGGCGTCGGCGGCGGGAGGGGTCGGGAGGAAGCGGCGGTGGGCCGGGTTCGACTACTACGTGCTGGCGCTGC AGTGGCCGGGCACCGTCTGCCGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGCTCACATCCGCTCAAATTC TTCACGATCCATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAGGCCAACCACATTCGACGGCAA CAAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTGGCCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTG GGAAAAGGCCATTTTGGGTGCATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTAC TTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGAAAGCTCTGAAGAAAGCACATATTTATCCTAGAGGAGG CAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGAATTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACG GCTCAGTTCAAGAACTGAGGCTCTGCTTCCACAAGGATTATCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGTT AGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACACGCATTTGGCAATTCTACAGAAGGAATCAG TAACCAAGTCAACGTTGAGCACCAATCATATCAGTAG |