
Microexon ID | Ha_8:109680461-109680464:- |
Species | Helianthus annuus | Coordinates | 8:109680461..109680464 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | TGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCCACCTCAGTAGTAGGCGACCAACAAGGGTATTTC |
Microexon-tag Amino Acid Seq | CKMSSSCTQKRPFWAHQWEKHGTCATSVVGDQQGYF |
Microexon-tag spanning region | 109680319-109680631 |
Microexon-tag prediction score | 0.8698 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG19205x |
Reference Transcript ID | OTG19205 |
Gene ID | HannXRQ_Chr08g0231491 |
Gene Name | NA |
Transcript ID | OTG19205 |
Protein ID | OTG19205 |
Gene ID | HannXRQ_Chr08g0231491 |
Gene Name | NA |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 4.1e-44 |
Motif start | 55 |
Motif end | 242 |
Protein seq | >OTG19205 MSSCCLYKYQCLPHLLHHKSSTNRKLGCITTMASHLTTVVLLSVLLFGFTYAVDFDYFTLVLQWPATACEINSKTCCPYN GCCPGGSPPPGFTIRSLWPDYNDGTYPECCEGAPYNENSLSSLSDAMTKYWTILNCKMSSSCTQKRPFWAHQWEKHGTCA TSVVGDQQGYFLTTLQLYLKYNVTDVLIQAKIKPSNSKTYPSASIISAIEDAFDTTPQLTCNDDTVYQVRLCFDKEFKVR ECVGESNKCPQYVRLPKFAFRNVTTSTEDWLMSTIKSVV* |
CDS seq | >OTG19205 ATGTCATCATGCTGCCTATATAAGTACCAATGCCTGCCTCATCTCCTTCACCACAAATCTAGCACAAACAGAAAACTAGG TTGTATAACAACAATGGCTTCGCATCTGACCACCGTGGTTCTCCTATCGGTTCTGCTCTTCGGATTTACCTACGCCGTTG ATTTCGATTACTTCACGTTGGTTCTTCAATGGCCTGCAACTGCCTGCGAAATAAATTCCAAAACATGCTGTCCTTACAAT GGTTGTTGCCCAGGAGGAAGTCCTCCACCAGGATTCACAATCAGATCACTATGGCCCGATTACAATGACGGAACATATCC AGAATGTTGTGAAGGTGCTCCTTATAATGAGAACTCGCTTTCATCATTGAGTGATGCTATGACCAAGTATTGGACGATAC TAAATTGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCC ACCTCAGTAGTAGGCGACCAACAAGGGTATTTCCTGACAACCCTTCAATTGTATTTGAAGTATAATGTCACGGACGTTCT TATACAAGCAAAAATTAAACCTTCAAATTCAAAGACATACCCATCAGCTAGCATTATTTCTGCTATTGAAGATGCTTTCG ATACAACACCTCAGTTGACCTGCAACGATGATACTGTATACCAAGTCCGTTTGTGTTTTGACAAGGAATTTAAGGTTCGA GAGTGTGTAGGAGAAAGCAACAAATGTCCTCAATATGTCAGATTACCAAAATTTGCATTCAGAAATGTCACCACGAGTAC TGAGGATTGGTTGATGTCTACTATTAAATCAGTTGTTTGA |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | TGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCCACCTCAGTAGTAGGCGACCAACAAGGGTATTTC |
Microexon-tag Amino Acid seq | CKMSSSCTQKRPFWAHQWEKHGTCATSVVGDQQGYF |
Transcript ID | OTG19205 |
Gene ID | Ha.53822 |
Gene Name | NA |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 4.1e-44 |
Motif start | 55 |
Motif end | 242 |
Protein seq | >OTG19205 MSSCCLYKYQCLPHLLHHKSSTNRKLGCITTMASHLTTVVLLSVLLFGFTYAVDFDYFTLVLQWPATACEINSKTCCPYN GCCPGGSPPPGFTIRSLWPDYNDGTYPECCEGAPYNENSLSSLSDAMTKYWTILNCKMSSSCTQKRPFWAHQWEKHGTCA TSVVGDQQGYFLTTLQLYLKYNVTDVLIQAKIKPSNSKTYPSASIISAIEDAFDTTPQLTCNDDTVYQVRLCFDKEFKVR ECVGESNKCPQYVRLPKFAFRNVTTSTEDWLMSTIKSVV* |
CDS seq | >OTG19205 ATGTCATCATGCTGCCTATATAAGTACCAATGCCTGCCTCATCTCCTTCACCACAAATCTAGCACAAACAGAAAACTAGG TTGTATAACAACAATGGCTTCGCATCTGACCACCGTGGTTCTCCTATCGGTTCTGCTCTTCGGATTTACCTACGCCGTTG ATTTCGATTACTTCACGTTGGTTCTTCAATGGCCTGCAACTGCCTGCGAAATAAATTCCAAAACATGCTGTCCTTACAAT GGTTGTTGCCCAGGAGGAAGTCCTCCACCAGGATTCACAATCAGATCACTATGGCCCGATTACAATGACGGAACATATCC AGAATGTTGTGAAGGTGCTCCTTATAATGAGAACTCGCTTTCATCATTGAGTGATGCTATGACCAAGTATTGGACGATAC TAAATTGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCC ACCTCAGTAGTAGGCGACCAACAAGGGTATTTCCTGACAACCCTTCAATTGTATTTGAAGTATAATGTCACGGACGTTCT TATACAAGCAAAAATTAAACCTTCAAATTCAAAGACATACCCATCAGCTAGCATTATTTCTGCTATTGAAGATGCTTTCG ATACAACACCTCAGTTGACCTGCAACGATGATACTGTATACCAAGTCCGTTTGTGTTTTGACAAGGAATTTAAGGTTCGA GAGTGTGTAGGAGAAAGCAACAAATGTCCTCAATATGTCAGATTACCAAAATTTGCATTCAGAAATGTCACCACGAGTAC TGAGGATTGGTTGATGTCTACTATTAAATCAGTTGTTTGA |