Microexon ID Ha_8:109680461-109680464:-
Species Helianthus annuus
Coordinates 8:109680461..109680464
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq TGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCCACCTCAGTAGTAGGCGACCAACAAGGGTATTTC
Microexon-tag Amino Acid Seq CKMSSSCTQKRPFWAHQWEKHGTCATSVVGDQQGYF
Microexon-tag spanning region109680319-109680631
Microexon-tag prediction score0.8698
Overlapped with the annotated transcript (%) 100
New Transcript ID OTG19205x
Reference Transcript ID OTG19205
Gene ID HannXRQ_Chr08g0231491
Gene Name NA
Transcript ID OTG19205
Protein ID OTG19205
Gene ID HannXRQ_Chr08g0231491
Gene Name NA
Pfam domain motif Ribonuclease_T2
Motif E-value 4.1e-44
Motif start 55
Motif end 242
Protein seq >OTG19205
MSSCCLYKYQCLPHLLHHKSSTNRKLGCITTMASHLTTVVLLSVLLFGFTYAVDFDYFTLVLQWPATACEINSKTCCPYN
GCCPGGSPPPGFTIRSLWPDYNDGTYPECCEGAPYNENSLSSLSDAMTKYWTILNCKMSSSCTQKRPFWAHQWEKHGTCA
TSVVGDQQGYFLTTLQLYLKYNVTDVLIQAKIKPSNSKTYPSASIISAIEDAFDTTPQLTCNDDTVYQVRLCFDKEFKVR
ECVGESNKCPQYVRLPKFAFRNVTTSTEDWLMSTIKSVV*
CDS seq >OTG19205
ATGTCATCATGCTGCCTATATAAGTACCAATGCCTGCCTCATCTCCTTCACCACAAATCTAGCACAAACAGAAAACTAGG
TTGTATAACAACAATGGCTTCGCATCTGACCACCGTGGTTCTCCTATCGGTTCTGCTCTTCGGATTTACCTACGCCGTTG
ATTTCGATTACTTCACGTTGGTTCTTCAATGGCCTGCAACTGCCTGCGAAATAAATTCCAAAACATGCTGTCCTTACAAT
GGTTGTTGCCCAGGAGGAAGTCCTCCACCAGGATTCACAATCAGATCACTATGGCCCGATTACAATGACGGAACATATCC
AGAATGTTGTGAAGGTGCTCCTTATAATGAGAACTCGCTTTCATCATTGAGTGATGCTATGACCAAGTATTGGACGATAC
TAAATTGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCC
ACCTCAGTAGTAGGCGACCAACAAGGGTATTTCCTGACAACCCTTCAATTGTATTTGAAGTATAATGTCACGGACGTTCT
TATACAAGCAAAAATTAAACCTTCAAATTCAAAGACATACCCATCAGCTAGCATTATTTCTGCTATTGAAGATGCTTTCG
ATACAACACCTCAGTTGACCTGCAACGATGATACTGTATACCAAGTCCGTTTGTGTTTTGACAAGGAATTTAAGGTTCGA
GAGTGTGTAGGAGAAAGCAACAAATGTCCTCAATATGTCAGATTACCAAAATTTGCATTCAGAAATGTCACCACGAGTAC
TGAGGATTGGTTGATGTCTACTATTAAATCAGTTGTTTGA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq TGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCCACCTCAGTAGTAGGCGACCAACAAGGGTATTTC
Microexon-tag Amino Acid seq CKMSSSCTQKRPFWAHQWEKHGTCATSVVGDQQGYF
Transcript ID OTG19205
Gene ID Ha.53822
Gene Name NA
Pfam domain motif Ribonuclease_T2
Motif E-value 4.1e-44
Motif start 55
Motif end 242
Protein seq >OTG19205
MSSCCLYKYQCLPHLLHHKSSTNRKLGCITTMASHLTTVVLLSVLLFGFTYAVDFDYFTLVLQWPATACEINSKTCCPYN
GCCPGGSPPPGFTIRSLWPDYNDGTYPECCEGAPYNENSLSSLSDAMTKYWTILNCKMSSSCTQKRPFWAHQWEKHGTCA
TSVVGDQQGYFLTTLQLYLKYNVTDVLIQAKIKPSNSKTYPSASIISAIEDAFDTTPQLTCNDDTVYQVRLCFDKEFKVR
ECVGESNKCPQYVRLPKFAFRNVTTSTEDWLMSTIKSVV*
CDS seq >OTG19205
ATGTCATCATGCTGCCTATATAAGTACCAATGCCTGCCTCATCTCCTTCACCACAAATCTAGCACAAACAGAAAACTAGG
TTGTATAACAACAATGGCTTCGCATCTGACCACCGTGGTTCTCCTATCGGTTCTGCTCTTCGGATTTACCTACGCCGTTG
ATTTCGATTACTTCACGTTGGTTCTTCAATGGCCTGCAACTGCCTGCGAAATAAATTCCAAAACATGCTGTCCTTACAAT
GGTTGTTGCCCAGGAGGAAGTCCTCCACCAGGATTCACAATCAGATCACTATGGCCCGATTACAATGACGGAACATATCC
AGAATGTTGTGAAGGTGCTCCTTATAATGAGAACTCGCTTTCATCATTGAGTGATGCTATGACCAAGTATTGGACGATAC
TAAATTGCAAAATGTCATCATCATGCACCCAAAAGAGACCATTTTGGGCTCATCAGTGGGAGAAACATGGTACATGTGCC
ACCTCAGTAGTAGGCGACCAACAAGGGTATTTCCTGACAACCCTTCAATTGTATTTGAAGTATAATGTCACGGACGTTCT
TATACAAGCAAAAATTAAACCTTCAAATTCAAAGACATACCCATCAGCTAGCATTATTTCTGCTATTGAAGATGCTTTCG
ATACAACACCTCAGTTGACCTGCAACGATGATACTGTATACCAAGTCCGTTTGTGTTTTGACAAGGAATTTAAGGTTCGA
GAGTGTGTAGGAGAAAGCAACAAATGTCCTCAATATGTCAGATTACCAAAATTTGCATTCAGAAATGTCACCACGAGTAC
TGAGGATTGGTTGATGTCTACTATTAAATCAGTTGTTTGA