
Microexon ID | Ha_8:108535372-108535375:- |
Species | Helianthus annuus | Coordinates | 8:108535372..108535375 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | AGTAAAGCTTCAACATGCCATAACAAAAAGGGACTGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTC |
Microexon-tag Amino Acid Seq | SKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYF |
Microexon-tag spanning region | 108535109-108535565 |
Microexon-tag prediction score | 0.9454 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG19196x |
Reference Transcript ID | OTG19196 |
Gene ID | HannXRQ_Chr08g0231371 |
Gene Name | RNS2 |
Transcript ID | OTG19196 |
Protein ID | OTG19196 |
Gene ID | HannXRQ_Chr08g0231371 |
Gene Name | RNS2 |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 6.9e-48 |
Motif start | 42 |
Motif end | 229 |
Protein seq | >OTG19196 MTSLSISMILASVLFAGLLTAVQVNGDSAVELVATVAEQREFDYFALAVQWPPTYCTKSTKCCDQSGCCRGEDSPTWFTI HGLWPDYNDGSWPSCCSGPAFDETEISSLLNVLDKYWPTLSCSKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYFVT ALNLYFKYNVTEVLFDAGYVPSNSEMYPSGGITAAIENAFHTTPQLVCLKGALEEVRLCLTKDFKFRDCVAASDCPEYVS LPTFASLDATKPAGRLISGAESS* |
CDS seq | >OTG19196 ATGACGTCACTCTCAATCTCCATGATTCTTGCATCAGTTCTGTTCGCGGGATTGTTGACCGCTGTACAAGTCAACGGCGA CAGCGCAGTTGAATTGGTGGCGACTGTTGCTGAACAACGGGAGTTTGATTACTTTGCTTTGGCTGTTCAATGGCCCCCAA CTTACTGCACGAAATCGACTAAATGTTGTGATCAAAGCGGCTGTTGCCGAGGAGAAGATTCTCCAACGTGGTTCACAATC CACGGACTATGGCCAGATTACAACGATGGATCATGGCCATCGTGTTGTTCAGGTCCCGCTTTTGATGAAACAGAGATTTC TTCATTGCTTAATGTTTTGGACAAGTATTGGCCAACACTAAGTTGCAGTAAAGCTTCAACATGCCATAACAAAAAGGGAC TGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTCGTGACA GCCCTCAATTTGTATTTCAAATATAATGTCACGGAAGTTCTTTTTGACGCTGGATATGTACCTTCGAATTCTGAGATGTA CCCGTCAGGTGGCATTACTGCTGCTATTGAAAACGCTTTCCATACAACCCCTCAATTGGTCTGCTTAAAGGGTGCTTTAG AAGAAGTCCGTTTGTGTTTAACAAAGGATTTCAAGTTTCGAGACTGTGTCGCAGCTAGCGATTGTCCTGAGTATGTGAGC TTACCGACATTTGCATCCTTGGATGCCACCAAGCCTGCGGGTCGATTGATATCTGGCGCTGAGTCCTCTTGA |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | AGTAAAGCTTCAACATGCCATAACAAAAAGGGACTGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTC |
Microexon-tag Amino Acid seq | SKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYF |
Transcript ID | Ha.53809.1 |
Gene ID | Ha.53809 |
Gene Name | RNS2 |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 6.9e-48 |
Motif start | 42 |
Motif end | 229 |
Protein seq | >Ha.53809.1 MTSLSISMILASVLFAGLLTAVQVNGDSAVELVATVAEQREFDYFALAVQWPPTYCTKSTKCCDQSGCCRGEDSPTWFTI HGLWPDYNDGSWPSCCSGPAFDETEISSLLNVLDKYWPTLSCSKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYFVT ALNLYFKYNVTEVLFDAGYVPSNSEMYPSGGITAAIENAFHTTPQLVCLKGALEEVRLCLTKDFKFRDCVAASDCPEYVS LPTFASLDATKPAGRLISGAESS* |
CDS seq | >Ha.53809.1 ATGACGTCACTCTCAATCTCCATGATTCTTGCATCAGTTCTGTTCGCGGGATTGTTGACCGCTGTACAAGTCAACGGCGA CAGCGCAGTTGAATTGGTGGCGACTGTTGCTGAACAACGGGAGTTTGATTACTTTGCTTTGGCTGTTCAATGGCCCCCAA CTTACTGCACGAAATCGACTAAATGTTGTGATCAAAGCGGCTGTTGCCGAGGAGAAGATTCTCCAACGTGGTTCACAATC CACGGACTATGGCCAGATTACAACGATGGATCATGGCCATCGTGTTGTTCAGGTCCCGCTTTTGATGAAACAGAGATTTC TTCATTGCTTAATGTTTTGGACAAGTATTGGCCAACACTAAGTTGCAGTAAAGCTTCAACATGCCATAACAAAAAGGGAC TGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTCGTGACA GCCCTCAATTTGTATTTCAAATATAATGTCACGGAAGTTCTTTTTGACGCTGGATATGTACCTTCGAATTCTGAGATGTA CCCGTCAGGTGGCATTACTGCTGCTATTGAAAACGCTTTCCATACAACCCCTCAATTGGTCTGCTTAAAGGGTGCTTTAG AAGAAGTCCGTTTGTGTTTAACAAAGGATTTCAAGTTTCGAGACTGTGTCGCAGCTAGCGATTGTCCTGAGTATGTGAGC TTACCGACATTTGCATCCTTGGATGCCACCAAGCCTGCGGGTCGATTGATATCTGGCGCTGAGTCCTCTTAA |