Microexon ID Ha_8:108535372-108535375:-
Species Helianthus annuus
Coordinates 8:108535372..108535375
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq AGTAAAGCTTCAACATGCCATAACAAAAAGGGACTGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTC
Microexon-tag Amino Acid Seq SKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYF
Microexon-tag spanning region108535109-108535565
Microexon-tag prediction score0.9454
Overlapped with the annotated transcript (%) 100
New Transcript ID OTG19196x
Reference Transcript ID OTG19196
Gene ID HannXRQ_Chr08g0231371
Gene Name RNS2
Transcript ID OTG19196
Protein ID OTG19196
Gene ID HannXRQ_Chr08g0231371
Gene Name RNS2
Pfam domain motif Ribonuclease_T2
Motif E-value 6.9e-48
Motif start 42
Motif end 229
Protein seq >OTG19196
MTSLSISMILASVLFAGLLTAVQVNGDSAVELVATVAEQREFDYFALAVQWPPTYCTKSTKCCDQSGCCRGEDSPTWFTI
HGLWPDYNDGSWPSCCSGPAFDETEISSLLNVLDKYWPTLSCSKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYFVT
ALNLYFKYNVTEVLFDAGYVPSNSEMYPSGGITAAIENAFHTTPQLVCLKGALEEVRLCLTKDFKFRDCVAASDCPEYVS
LPTFASLDATKPAGRLISGAESS*
CDS seq >OTG19196
ATGACGTCACTCTCAATCTCCATGATTCTTGCATCAGTTCTGTTCGCGGGATTGTTGACCGCTGTACAAGTCAACGGCGA
CAGCGCAGTTGAATTGGTGGCGACTGTTGCTGAACAACGGGAGTTTGATTACTTTGCTTTGGCTGTTCAATGGCCCCCAA
CTTACTGCACGAAATCGACTAAATGTTGTGATCAAAGCGGCTGTTGCCGAGGAGAAGATTCTCCAACGTGGTTCACAATC
CACGGACTATGGCCAGATTACAACGATGGATCATGGCCATCGTGTTGTTCAGGTCCCGCTTTTGATGAAACAGAGATTTC
TTCATTGCTTAATGTTTTGGACAAGTATTGGCCAACACTAAGTTGCAGTAAAGCTTCAACATGCCATAACAAAAAGGGAC
TGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTCGTGACA
GCCCTCAATTTGTATTTCAAATATAATGTCACGGAAGTTCTTTTTGACGCTGGATATGTACCTTCGAATTCTGAGATGTA
CCCGTCAGGTGGCATTACTGCTGCTATTGAAAACGCTTTCCATACAACCCCTCAATTGGTCTGCTTAAAGGGTGCTTTAG
AAGAAGTCCGTTTGTGTTTAACAAAGGATTTCAAGTTTCGAGACTGTGTCGCAGCTAGCGATTGTCCTGAGTATGTGAGC
TTACCGACATTTGCATCCTTGGATGCCACCAAGCCTGCGGGTCGATTGATATCTGGCGCTGAGTCCTCTTGA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq AGTAAAGCTTCAACATGCCATAACAAAAAGGGACTGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTC
Microexon-tag Amino Acid seq SKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYF
Transcript ID Ha.53809.1
Gene ID Ha.53809
Gene Name RNS2
Pfam domain motif Ribonuclease_T2
Motif E-value 6.9e-48
Motif start 42
Motif end 229
Protein seq >Ha.53809.1
MTSLSISMILASVLFAGLLTAVQVNGDSAVELVATVAEQREFDYFALAVQWPPTYCTKSTKCCDQSGCCRGEDSPTWFTI
HGLWPDYNDGSWPSCCSGPAFDETEISSLLNVLDKYWPTLSCSKASTCHNKKGLFWAHEWEKHGTCSSAVTGDEYSYFVT
ALNLYFKYNVTEVLFDAGYVPSNSEMYPSGGITAAIENAFHTTPQLVCLKGALEEVRLCLTKDFKFRDCVAASDCPEYVS
LPTFASLDATKPAGRLISGAESS*
CDS seq >Ha.53809.1
ATGACGTCACTCTCAATCTCCATGATTCTTGCATCAGTTCTGTTCGCGGGATTGTTGACCGCTGTACAAGTCAACGGCGA
CAGCGCAGTTGAATTGGTGGCGACTGTTGCTGAACAACGGGAGTTTGATTACTTTGCTTTGGCTGTTCAATGGCCCCCAA
CTTACTGCACGAAATCGACTAAATGTTGTGATCAAAGCGGCTGTTGCCGAGGAGAAGATTCTCCAACGTGGTTCACAATC
CACGGACTATGGCCAGATTACAACGATGGATCATGGCCATCGTGTTGTTCAGGTCCCGCTTTTGATGAAACAGAGATTTC
TTCATTGCTTAATGTTTTGGACAAGTATTGGCCAACACTAAGTTGCAGTAAAGCTTCAACATGCCATAACAAAAAGGGAC
TGTTTTGGGCTCATGAGTGGGAGAAACATGGTACATGTTCCTCCGCAGTAACAGGCGATGAATATAGCTATTTCGTGACA
GCCCTCAATTTGTATTTCAAATATAATGTCACGGAAGTTCTTTTTGACGCTGGATATGTACCTTCGAATTCTGAGATGTA
CCCGTCAGGTGGCATTACTGCTGCTATTGAAAACGCTTTCCATACAACCCCTCAATTGGTCTGCTTAAAGGGTGCTTTAG
AAGAAGTCCGTTTGTGTTTAACAAAGGATTTCAAGTTTCGAGACTGTGTCGCAGCTAGCGATTGTCCTGAGTATGTGAGC
TTACCGACATTTGCATCCTTGGATGCCACCAAGCCTGCGGGTCGATTGATATCTGGCGCTGAGTCCTCTTAA