
Microexon ID | Gm_16:2737058-2737061:- |
Species | Glycine max | Coordinates | 16:2737058..2737061 |
Microexon Cluster ID | MEP04 |
Size | 4 |
Phase | 0 |
Pfam Domain Motif | Ribonuclease_T2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 51,4,53 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | AGCAAGCCATCATTATGCCATGGTGGGAAAGGAACATTTTGGGCTCATGAGTGGGAGAAACATGGCACATGCTCTTATCCTGTGTTTCGAAATGAATATGATTATTTT |
Microexon-tag Amino Acid Seq | SKPSLCHGGKGTFWAHEWEKHGTCSYPVFRNEYDYF |
Microexon-tag spanning region | 2736694-2737225 |
Microexon-tag prediction score | 0.956 |
Overlapped with the annotated transcript (%) | 94.44 |
New Transcript ID | KRH06524x |
Reference Transcript ID | KRH06524 |
Gene ID | GLYMA_16G028200 |
Gene Name | NA |
Gm_16:2737058-2737061:- does not have available information here.
Microexon DNA seq | TGGG |
Microexon Amino Acid seq | WE |
Microexon-tag DNA Seq | AGCAAGCCATCATTATGCCATGGTGGGAAAGGAACATTTTGGGCTCATGAGTGGGAGAAACATGGCACATGCTCTTATCCTGTGTTTCGAAATGAATATGATTATTTT |
Microexon-tag Amino Acid seq | SKPSLCHGGKGTFWAHEWEKHGTCSYPVFRNEYDYF |
Transcript ID | Gm.19529.1 |
Gene ID | Gm.19529 |
Gene Name | NA |
Pfam domain motif | Ribonuclease_T2 |
Motif E-value | 2.2e-48 |
Motif start | 40 |
Motif end | 227 |
Protein seq | >Gm.19529.1 MPPLTSWLVLPILVLLAAPATTPPARASPVASSFDGQREFDYFKLALQWPGTYCKRTRSCCPTNGCCRGSNSPAVFTIHG LWPDYNDGSWPSCCSGSSFDPKEISTLTNALEQYWPSLSCSKPSLCHGGKGTFWAHEWEKHGTCSYPVFRNEYDYFLTVL NVYFKYNITSVLNDAGYVPSNTEKYPLGGIISAIENAFHASPQIVCSKDSIEELYLCFYKNFQPRDCALGSDIKIDMVTS KKSCPKYVSLPESVSVGHNGLQSRVSDDVAL* |
CDS seq | >Gm.19529.1 ATGCCTCCATTGACTTCGTGGCTGGTGCTGCCCATTCTCGTGTTGTTGGCGGCTCCGGCAACAACCCCTCCAGCACGTGC CTCACCGGTCGCGTCGTCCTTCGACGGTCAACGGGAGTTTGACTATTTCAAGTTAGCGTTGCAATGGCCCGGCACTTACT GCAAACGCACCCGCAGTTGCTGCCCCACCAATGGTTGCTGCAGAGGCTCCAATTCTCCAGCAGTATTCACCATACATGGA CTCTGGCCTGACTATAATGATGGAAGCTGGCCGTCCTGTTGCTCTGGATCTAGTTTTGATCCAAAAGAGATATCAACATT GACTAATGCTTTAGAGCAATATTGGCCATCATTGAGCTGTAGCAAGCCATCATTATGCCATGGTGGGAAAGGAACATTTT GGGCTCATGAGTGGGAGAAACATGGCACATGCTCTTATCCTGTGTTTCGAAATGAATATGATTATTTTCTGACAGTTCTG AATGTCTATTTCAAATATAATATTACGAGCGTTCTAAATGATGCTGGATATGTTCCCTCTAATACAGAAAAGTATCCCCT TGGAGGCATCATCTCTGCCATTGAGAATGCTTTTCATGCATCTCCTCAAATAGTTTGCTCAAAAGATTCCATTGAGGAAC TTTACCTATGCTTTTATAAGAACTTCCAGCCACGAGATTGTGCTCTTGGATCTGACATTAAAATCGACATGGTTACTTCA AAAAAATCTTGTCCCAAATATGTTAGCTTGCCAGAATCTGTATCAGTGGGGCACAATGGACTTCAAAGTCGGGTCTCTGA TGATGTAGCTCTTTAA |