Microexon ID At_2:16592241-16592244:+
Species Arabidopsis thaliana
Coordinates 2:16592241..16592244
Microexon Cluster ID MEP04
Size 4
Phase 0
Pfam Domain Motif Ribonuclease_T2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 51,4,53
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RGYWMWYCATCAACHTGCYWYRGTGGAAARGGAYYATTYTGGGCTCATGAGTGGGARAARCATGGRACWTGYTCYTCYCCWGTWRTTCRWGATGAATAYARYTAYTTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq GGTTCTCCATCATCATGCAATGGTGGGAAAGGGTCATTTTGGGGCCACGAGTGGGAGAAACATGGGACTTGTTCTTCTCCTGTTTTTCATGATGAGTATAATTACTTC
Microexon-tag Amino Acid Seq GSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYF
Microexon-tag spanning region16592048-16592528
Microexon-tag prediction score0.9704
Overlapped with the annotated transcript (%) 100
New Transcript ID AT2G39780.1x
Reference Transcript ID AT2G39780.1
Gene ID AT2G39780
Gene Name RNS2
Transcript ID AT2G39780.1
Protein ID AT2G39780.1
Gene ID AT2G39780
Gene Name RNS2
Pfam domain motif Ribonuclease_T2
Motif E-value 1.3e-48
Motif start 32
Motif end 219
Protein seq >AT2G39780.1
MASRLCLLLLVACIAGAFAGDVIELNRSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDG
SWPSCCYRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNV
TDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAIDEIRICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEY
TPLDGEAMVLKMPTEREAL*
CDS seq >AT2G39780.1
ATGGCGTCACGTTTATGTCTTCTCCTTCTCGTTGCGTGTATCGCCGGAGCATTTGCCGGAGACGTCATCGAACTCAATCG
ATCTCAGAGGGAGTTCGATTATTTCGCTCTATCTCTTCAATGGCCTGGAACCTATTGCCGTGGAACTCGCCATTGTTGCT
CCAAAAACGCTTGCTGCAGAGGCTCCGATGCTCCAACTCAATTCACAATTCATGGGTTATGGCCTGACTATAACGATGGT
TCGTGGCCTTCATGTTGTTATCGATCTGACTTTAAAGAGAAGGAGATTTCAACGTTGATGGATGGTCTTGAGAAGTACTG
GCCTAGTCTCAGTTGTGGTTCTCCATCATCATGCAATGGTGGGAAAGGGTCATTTTGGGGCCACGAGTGGGAGAAACATG
GGACTTGTTCTTCTCCTGTTTTTCATGATGAGTATAATTACTTCCTTACCACACTTAATCTCTACTTGAAGCATAATGTC
ACGGATGTCCTTTATCAAGCTGGCTATGTTGCTTCCAACAGTGAAAAGTATCCTCTAGGAGGTATCGTAACAGCCATTCA
GAATGCATTTCATATCACCCCTGAAGTGGTTTGCAAAAGAGATGCAATCGATGAAATACGTATATGCTTCTATAAAGATT
TTAAGCCCAGGGACTGTGTTGGTTCACAAGATTTGACATCTAGAAAGTCATGCCCCAAGTACGTAAGTTTGCCGGAATAC
ACGCCATTAGATGGTGAAGCTATGGTTCTGAAGATGCCAACAGAAAGAGAAGCTCTTTGA
Microexon DNA seq TGGG
Microexon Amino Acid seq WE
Microexon-tag DNA Seq GGTTCTCCATCATCATGCAATGGTGGGAAAGGGTCATTTTGGGGCCACGAGTGGGAGAAACATGGGACTTGTTCTTCTCCTGTTTTTCATGATGAGTATAATTACTTC
Microexon-tag Amino Acid seq GSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYF
Transcript ID AT2G39780.1
Gene ID At.10905
Gene Name RNS2
Pfam domain motif Ribonuclease_T2
Motif E-value 1.4e-48
Motif start 32
Motif end 219
Protein seq >AT2G39780.1
MASRLCLLLLVACIAGAFAGDVIELNRSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDG
SWPSCCYRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNV
TDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAIDEIRICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEY
TPLDGEAMVLKMPTEREAL*
CDS seq >AT2G39780.1
ATGGCGTCACGTTTATGTCTTCTCCTTCTCGTTGCGTGTATCGCCGGAGCATTTGCCGGAGACGTCATCGAACTCAATCG
ATCTCAGAGGGAGTTCGATTATTTCGCTCTATCTCTTCAATGGCCTGGAACCTATTGCCGTGGAACTCGCCATTGTTGCT
CCAAAAACGCTTGCTGCAGAGGCTCCGATGCTCCAACTCAATTCACAATTCATGGGTTATGGCCTGACTATAACGATGGT
TCGTGGCCTTCATGTTGTTATCGATCTGACTTTAAAGAGAAGGAGATTTCAACGTTGATGGATGGTCTTGAGAAGTACTG
GCCTAGTCTCAGTTGTGGTTCTCCATCATCATGCAATGGTGGGAAAGGGTCATTTTGGGGCCACGAGTGGGAGAAACATG
GGACTTGTTCTTCTCCTGTTTTTCATGATGAGTATAATTACTTCCTTACCACACTTAATCTCTACTTGAAGCATAATGTC
ACGGATGTCCTTTATCAAGCTGGCTATGTTGCTTCCAACAGTGAAAAGTATCCTCTAGGAGGTATCGTAACAGCCATTCA
GAATGCATTTCATATCACCCCTGAAGTGGTTTGCAAAAGAGATGCAATCGATGAAATACGTATATGCTTCTATAAAGATT
TTAAGCCCAGGGACTGTGTTGGTTCACAAGATTTGACATCTAGAAAGTCATGCCCCAAGTACGTAAGTTTGCCGGAATAC
ACGCCATTAGATGGTGAAGCTATGGTTCTGAAGATGCCAACAGAAAGAGAAGCTCTTTGA