| Microexon ID | Zm_5:173629170-173629172:- |
| Species | Zea mays | Coordinates | 5:173629170..173629172 |
| Microexon Cluster ID | MEP03 |
| Size | 3 |
| Phase | 0 |
| Pfam Domain Motif | CHORD |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 54,3,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GCA |
| Microexon Amino Acid seq | A |
| Microexon-tag DNA Seq | GCCATATTCACCAACGATGACAACCGCGAGGGCTCCTGCCAATACCACCCCTCCGCACCTATGTTTCATGACGGCATGAAAGAATGGAGCTGCTGCAAGCAAAGAAGC |
| Microexon-tag Amino Acid Seq | AIFTNDDNREGSCQYHPSAPMFHDGMKEWSCCKQRS |
| Microexon-tag spanning region | 173629046-173631329 |
| Microexon-tag prediction score | 0.9628 |
| Overlapped with the annotated transcript (%) | 97.22 |
| New Transcript ID | Zm00001d016716_T002x |
| Reference Transcript ID | Zm00001d016716_T002 |
| Gene ID | Zm00001d016716 |
| Gene Name | RAR1 disease resistance protein homolog1 |
Zm_5:173629170-173629172:- does not have available information here.
| Microexon DNA seq | GCA |
| Microexon Amino Acid seq | A |
| Microexon-tag DNA Seq | GCCATATTCACCAACGATGACAACCGCGAGGGCTCCTGCCAATACCACCCCTCCGCACCTATGTTTCATGACGGCATGAAAGAATGGAGCTGCTGCAAGCAAAGAAGC |
| Microexon-tag Amino Acid seq | AIFTNDDNREGSCQYHPSAPMFHDGMKEWSCCKQRS |
| Transcript ID | Zm.24481.1 |
| Gene ID | Zm.24481 |
| Gene Name | RAR1 disease resistance protein homolog1 |
| Pfam domain motif | CHORD |
| Motif E-value | 2.6e-25 |
| Motif start | 17 |
| Motif end | 77 |
| Protein seq | >Zm.24481.1 MSTTTEAAKSGSAAPVRCQRIGCDAIFTNDDNREGSCQYHPSAPMFHDGMKEWSCCKQRSHDFSLFLQIPGCTTGKHTTE KPITKAVSSNRTKATPIQSSKQGVGVDVCARCRQGFFCSDHGSQPKPQKPAATDDTNKEPVEKSAVPPPKKRIDVNELRT CKNKGCGKSYKEKDNHDSACDYHPGPAVFHDRMRGWKCCDVHVKEFDEFMEIPTCTKGWHNADAV* |
| CDS seq | >Zm.24481.1 ATGTCAACGACGACGGAGGCGGCAAAGAGCGGCTCAGCCGCACCGGTGCGGTGCCAGCGGATCGGCTGCGACGCCATATT CACCAACGATGACAACCGCGAGGGCTCCTGCCAATACCACCCCTCCGCACCTATGTTTCATGACGGCATGAAAGAATGGA GCTGCTGCAAGCAAAGAAGCCATGATTTCAGCTTATTTTTGCAGATACCTGGATGCACAACAGGAAAGCATACAACCGAA AAACCAATCACAAAAGCTGTTTCATCTAACCGTACAAAGGCAACACCGATCCAGTCCTCTAAGCAGGGTGTGGGAGTTGA TGTGTGTGCAAGGTGTCGTCAAGGTTTCTTTTGCTCCGATCATGGATCACAGCCCAAGCCACAAAAGCCAGCTGCTACCG ACGATACAAACAAGGAACCTGTTGAGAAATCAGCTGTTCCACCGCCCAAGAAAAGGATCGATGTAAATGAGCTGAGGACA TGTAAAAATAAAGGATGTGGTAAATCCTACAAGGAGAAGGATAACCATGATTCTGCATGTGACTACCATCCAGGTCCTGC CGTTTTCCATGACAGGATGAGAGGGTGGAAATGCTGTGATGTTCATGTCAAGGAGTTTGACGAGTTTATGGAGATACCTA CATGCACAAAGGGTTGGCATAATGCTGATGCGGTGTGA |