
Microexon ID | Ta_2B:622701864-622701866:+ |
Species | Triticum Aestivum | Coordinates | 2B:622701864..622701866 |
Microexon Cluster ID | MEP03 |
Size | 3 |
Phase | 0 |
Pfam Domain Motif | CHORD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 54,3,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGA |
Microexon Amino Acid seq | G |
Microexon-tag DNA Seq | GCCATGTTCACCGACGACGACAACCCCGACGGCTCCTGCCACTACCACCCCTCCGGACCTATGTTTCATGATGGCATGAAAGAGTGGAGCTGTTGCAAGCAAAGAAGC |
Microexon-tag Amino Acid Seq | AMFTDDDNPDGSCHYHPSGPMFHDGMKEWSCCKQRS |
Microexon-tag spanning region | 622700208-622701994 |
Microexon-tag prediction score | 0.9867 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2B02G433400.1x |
Reference Transcript ID | TraesCS2B02G433400.1 |
Gene ID | TraesCS2B02G433400 |
Gene Name | NA |
Transcript ID | TraesCS2B02G433400.1 |
Protein ID | |
Gene ID | TraesCS2B02G433400 |
Gene Name | |
Pfam domain motif | CHORD |
Motif E-value | 4.20E-24 |
Motif start | 18 |
Motif end | 78 |
Protein seq | >TraesCS2B02G433400.1 MSAETEKSAAAPAPAPMRCQRIGCDAMFTDDDNPDGSCHYHPSGPMFHDGMKEWSCCKQRSHDFSLFLAIPGCATGKHTT EKPVTKAVSLNSKATPPKLAPLQSSKQGVETEACSRCRQGFFCSDHGSQPKAQKPVAVNGTNTEPVEKCSVPQPKKKVVN INEPRVCKNKGCGKTYKEKDNHDAACEYHPGPAVFHDRNRGWKCCDVHVKEFDEFMEIPPCTKGWHNADAV* |
CDS seq | >TraesCS2B02G433400.1 ATGTCGGCGGAGACGGAGAAGAGCGCCGCCGCGCCCGCGCCCGCGCCCATGCGGTGCCAGCGAATAGGCTGCGACGCCAT GTTCACCGACGACGACAACCCCGACGGCTCCTGCCACTACCACCCCTCCGGACCTATGTTTCATGATGGCATGAAAGAGT GGAGCTGTTGCAAGCAAAGAAGCCATGATTTTAGCTTATTTTTAGCTATTCCTGGATGTGCCACAGGGAAGCATACAACT GAGAAACCAGTCACAAAAGCTGTTTCTCTTAACTCAAAGGCAACCCCACCAAAGTTAGCTCCACTCCAGTCTTCTAAGCA GGGTGTGGAAACCGAGGCCTGCTCCAGGTGCCGTCAGGGTTTCTTTTGCTCCGACCATGGATCACAGCCCAAGGCACAAA AACCAGTTGCTGTAAATGGTACAAATACGGAACCTGTCGAGAAATGCTCGGTTCCACAGCCCAAGAAAAAGGTTGTTAAT ATAAACGAGCCTAGGGTTTGTAAGAATAAAGGATGTGGTAAAACCTACAAGGAGAAGGATAACCATGATGCTGCATGCGA ATACCATCCAGGCCCTGCGGTTTTCCATGACAGGAATAGAGGGTGGAAGTGTTGCGATGTCCATGTCAAGGAGTTTGACG AATTTATGGAGATACCTCCATGCACAAAGGGGTGGCACAATGCTGATGCCGTGTGA |
Ta_2B:622701864-622701866:+ does not have available information here.