Microexon ID Sm_GL377586:1110547-1110549:-
Species Selaginella moellendorffii
Coordinates GL377586:1110547..1110549
Microexon Cluster ID MEP03
Size 3
Phase 0
Pfam Domain Motif CHORD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 54,3,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377586:1110547-1110549:- does not have available information here.
Sm_GL377586:1110547-1110549:- does not have available information here.
Microexon DNA seq CCG
Microexon Amino Acid seq P
Microexon-tag DNA Seq CTCTTCTCTCCCGATCAAAACGACGATGAGAAGGCTTGCTGCTACCATCCCGGCCCGCCCCTGTTTCACGACGGTGGGAAACAATGGAGTTGCTGCAAACAGCAGAGT
Microexon-tag Amino Acid seq LFSPDQNDDEKACCYHPGPPLFHDGGKQWSCCKQQS
Transcript ID Sm.12320.2
Gene ID Sm.12320
Gene Name NA
Pfam domain motif CHORD
Motif E-value 5e-24
Motif start 5
Motif end 66
Protein seq >Sm.12320.2
MGKVQCQRIGCDALFSPDQNDDEKACCYHPGPPLFHDGGKQWSCCKQQSHDFSLFLSIPGCTHGKHTSEKPKPAPKPSKT
LPQGDASNTNCLRCKQGFYCSDHGSKISCGPAAAPSKDVEKPAAKEASQSSVQAAPAALPNVIDLDAKRTCRNKGCGKAF
TERENHETACSYHPGPAVFHDRSRGWACCDVHVKEFDEFLEIPPCSKGWHSSQ*
CDS seq >Sm.12320.2
ATGGGGAAGGTCCAATGCCAGCGGATTGGATGCGACGCGCTCTTCTCTCCCGATCAAAACGACGATGAGAAGGCTTGCTG
CTACCATCCCGGCCCGCCCCTGTTTCACGACGGTGGGAAACAATGGAGTTGCTGCAAACAGCAGAGTCACGATTTTAGCT
TGTTCTTAAGCATTCCAGGCTGTACGCACGGAAAGCACACATCAGAGAAACCAAAGCCAGCTCCCAAGCCAAGCAAAACT
TTACCACAGGGAGACGCCAGCAACACCAATTGCTTGAGATGCAAACAAGGTTTCTACTGTTCAGATCACGGCTCAAAGAT
ATCGTGTGGACCAGCGGCAGCCCCCAGCAAAGACGTGGAAAAACCAGCTGCGAAAGAAGCTTCGCAATCATCGGTGCAAG
CAGCCCCGGCGGCCCTCCCCAACGTGATTGACTTGGATGCAAAGCGGACGTGCAGGAATAAAGGCTGCGGAAAGGCATTC
ACCGAGCGAGAGAACCATGAAACTGCTTGCAGTTATCATCCGGGCCCAGCTGTTTTTCACGACAGATCGAGAGGATGGGC
CTGCTGTGATGTTCATGTGAAGGAGTTTGACGAGTTCCTGGAGATCCCGCCGTGCTCGAAAGGCTGGCACAGCAGCCAAT
AG