
Microexon ID | Sm_GL377586:1110547-1110549:- |
Species | Selaginella moellendorffii | Coordinates | GL377586:1110547..1110549 |
Microexon Cluster ID | MEP03 |
Size | 3 |
Phase | 0 |
Pfam Domain Motif | CHORD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 54,3,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377586:1110547-1110549:- does not have available information here.
Sm_GL377586:1110547-1110549:- does not have available information here.
Microexon DNA seq | CCG |
Microexon Amino Acid seq | P |
Microexon-tag DNA Seq | CTCTTCTCTCCCGATCAAAACGACGATGAGAAGGCTTGCTGCTACCATCCCGGCCCGCCCCTGTTTCACGACGGTGGGAAACAATGGAGTTGCTGCAAACAGCAGAGT |
Microexon-tag Amino Acid seq | LFSPDQNDDEKACCYHPGPPLFHDGGKQWSCCKQQS |
Transcript ID | Sm.12320.2 |
Gene ID | Sm.12320 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 5e-24 |
Motif start | 5 |
Motif end | 66 |
Protein seq | >Sm.12320.2 MGKVQCQRIGCDALFSPDQNDDEKACCYHPGPPLFHDGGKQWSCCKQQSHDFSLFLSIPGCTHGKHTSEKPKPAPKPSKT LPQGDASNTNCLRCKQGFYCSDHGSKISCGPAAAPSKDVEKPAAKEASQSSVQAAPAALPNVIDLDAKRTCRNKGCGKAF TERENHETACSYHPGPAVFHDRSRGWACCDVHVKEFDEFLEIPPCSKGWHSSQ* |
CDS seq | >Sm.12320.2 ATGGGGAAGGTCCAATGCCAGCGGATTGGATGCGACGCGCTCTTCTCTCCCGATCAAAACGACGATGAGAAGGCTTGCTG CTACCATCCCGGCCCGCCCCTGTTTCACGACGGTGGGAAACAATGGAGTTGCTGCAAACAGCAGAGTCACGATTTTAGCT TGTTCTTAAGCATTCCAGGCTGTACGCACGGAAAGCACACATCAGAGAAACCAAAGCCAGCTCCCAAGCCAAGCAAAACT TTACCACAGGGAGACGCCAGCAACACCAATTGCTTGAGATGCAAACAAGGTTTCTACTGTTCAGATCACGGCTCAAAGAT ATCGTGTGGACCAGCGGCAGCCCCCAGCAAAGACGTGGAAAAACCAGCTGCGAAAGAAGCTTCGCAATCATCGGTGCAAG CAGCCCCGGCGGCCCTCCCCAACGTGATTGACTTGGATGCAAAGCGGACGTGCAGGAATAAAGGCTGCGGAAAGGCATTC ACCGAGCGAGAGAACCATGAAACTGCTTGCAGTTATCATCCGGGCCCAGCTGTTTTTCACGACAGATCGAGAGGATGGGC CTGCTGTGATGTTCATGTGAAGGAGTTTGACGAGTTCCTGGAGATCCCGCCGTGCTCGAAAGGCTGGCACAGCAGCCAAT AG |