Microexon ID Ps_NC_039365.1:28146976-28146978:+
Species Papaver somniferum
Coordinates NC_039365.1:28146976..28146978
Microexon Cluster ID MEP03
Size 3
Phase 0
Pfam Domain Motif CHORD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 54,3,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Ps_NC_039365.1:28146976-28146978:+ does not have available information here.
Transcript ID XM_026550202.1
Protein ID XP_026405987.1
Gene ID LOC113301419
Gene Name NA
Pfam domain motif CHORD
Motif E-value 7.1e-24
Motif start 8
Motif end 68
Protein seq >XP_026405987.1
MEKGSKVRCQRIGCDAMFTEDQNTEDSCTYHASGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKHTTEKPVIVKAAP
KKPVPFVAPASTTSSKLDCSRCRQGFFCSEHGSQAKANTTMPTSPILPKCSTDVQEVTPPPAKKIININEPQTCRNKGCG
RTFKEKDNSDDACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFMEIPPCTKGWHSSDPIS*
CDS seq >XM_026550202.1
ATGGAGAAGGGATCTAAGGTGAGATGTCAGAGAATAGGGTGTGATGCAATGTTCACTGAGGATCAAAATACTGAAGATTC
TTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGTCACGATT
TCAGCTTATTTTTAGCGCTTCCAGGATGCAAGACAGGTAAGCATACAACGGAAAAACCCGTGATTGTAAAAGCTGCACCG
AAGAAGCCAGTTCCCTTTGTTGCTCCAGCAAGCACTACCTCATCAAAGCTGGATTGTTCAAGATGCCGACAGGGCTTCTT
TTGCTCAGAACATGGTTCACAAGCTAAAGCAAACACAACTATGCCTACTTCTCCTATCCTCCCCAAGTGCAGTACCGACG
TTCAGGAAGTCACACCCCCTCCTGCAAAAAAGATAATCAACATTAATGAACCTCAGACTTGCAGGAACAAAGGATGTGGC
AGAACCTTCAAAGAAAAGGACAACAGTGATGATGCATGTAGTTACCACCCTGGTCCTGCCGTTTTCCACGACAGGATGAG
AGGGTGGAAATGCTGCGATGTTCATGTGAAGGAGTTCGATGAGTTCATGGAAATACCTCCATGTACAAAGGGGTGGCATA
GTTCAGATCCAATTTCTTAA
Microexon DNA seq GGG
Microexon Amino Acid seq G
Microexon-tag DNA Seq GCAATGTTCACTGAGGATCAAAATACTGAAGATTCTTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGT
Microexon-tag Amino Acid seq AMFTEDQNTEDSCTYHASGPIFHDGTKEWSCCKQRS
Transcript ID XM_026550202.1
Gene ID Ps.48580
Gene Name NA
Pfam domain motif CHORD
Motif E-value 7.1e-24
Motif start 8
Motif end 68
Protein seq >XM_026550202.1
MEKGSKVRCQRIGCDAMFTEDQNTEDSCTYHASGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKHTTEKPVIVKAAP
KKPVPFVAPASTTSSKLDCSRCRQGFFCSEHGSQAKANTTMPTSPILPKCSTDVQEVTPPPAKKIININEPQTCRNKGCG
RTFKEKDNSDDACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFMEIPPCTKGWHSSDPIS*
CDS seq >XM_026550202.1
ATGGAGAAGGGATCTAAGGTGAGATGTCAGAGAATAGGGTGTGATGCAATGTTCACTGAGGATCAAAATACTGAAGATTC
TTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGTCACGATT
TCAGCTTATTTTTAGCGCTTCCAGGATGCAAGACAGGTAAGCATACAACGGAAAAACCCGTGATTGTAAAAGCTGCACCG
AAGAAGCCAGTTCCCTTTGTTGCTCCAGCAAGCACTACCTCATCAAAGCTGGATTGTTCAAGATGCCGACAGGGCTTCTT
TTGCTCAGAACATGGTTCACAAGCTAAAGCAAACACAACTATGCCTACTTCTCCTATCCTCCCCAAGTGCAGTACCGACG
TTCAGGAAGTCACACCCCCTCCTGCAAAAAAGATAATCAACATTAATGAACCTCAGACTTGCAGGAACAAAGGATGTGGC
AGAACCTTCAAAGAAAAGGACAACAGTGATGATGCATGTAGTTACCACCCTGGTCCTGCCGTTTTCCACGACAGGATGAG
AGGGTGGAAATGCTGCGATGTTCATGTGAAGGAGTTCGATGAGTTCATGGAAATACCTCCATGTACAAAGGGGTGGCATA
GTTCAGATCCAATTTCTTAA