
Microexon ID | Ps_NC_039361.1:31233131-31233133:+ |
Species | Papaver somniferum | Coordinates | NC_039361.1:31233131..31233133 |
Microexon Cluster ID | MEP03 |
Size | 3 |
Phase | 0 |
Pfam Domain Motif | CHORD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 54,3,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ps_NC_039361.1:31233131-31233133:+ does not have available information here.
Ps_NC_039361.1:31233131-31233133:+ does not have available information here.
Microexon DNA seq | GGG |
Microexon Amino Acid seq | G |
Microexon-tag DNA Seq | GCAATGTTCACTGAGGATGAAAACACTGAAGATTCTTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGT |
Microexon-tag Amino Acid seq | AMFTEDENTEDSCTYHASGPIFHDGTKEWSCCKQRS |
Transcript ID | Ps.23229.1 |
Gene ID | Ps.23229 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 5e-24 |
Motif start | 8 |
Motif end | 68 |
Protein seq | >Ps.23229.1 MEKGSKVRCQRIGCDAMFTEDENTEDSCTYHASGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKHTTEKPVIVKAAP KKPVPFVAPASTTSSKLDCSRCRQGFFCSEHGSQAKSNTTMPTSPVLPKCSTDVQEVTPPPAKKIININEPQTCRNKGCG RTFKEKDNSDDACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFMEIPPCTKGWHSSDPIS* |
CDS seq | >Ps.23229.1 ATGGAGAAGGGATCTAAGGTGAGATGTCAGAGAATAGGGTGTGATGCAATGTTCACTGAGGATGAAAACACTGAAGATTC TTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGTCATGATT TCAGCTTATTTTTAGCGCTTCCAGGATGCAAGACAGGTAAGCATACAACGGAAAAACCCGTGATTGTAAAAGCTGCACCA AAGAAGCCAGTTCCCTTTGTTGCTCCAGCAAGCACTACCTCATCAAAGCTGGATTGTTCAAGATGCCGACAAGGCTTCTT TTGCTCAGAACATGGTTCACAAGCTAAATCAAACACAACTATGCCTACTTCTCCTGTGCTCCCCAAGTGCAGTACCGATG TTCAGGAAGTCACACCCCCTCCTGCAAAAAAGATAATCAACATTAATGAACCTCAGACTTGCAGGAACAAAGGATGTGGT AGAACCTTCAAAGAAAAGGACAACAGTGATGATGCATGTAGTTACCACCCTGGTCCTGCCGTTTTCCACGACAGGATGAG AGGGTGGAAATGCTGCGATGTTCATGTGAAGGAGTTCGACGAGTTCATGGAAATACCTCCATGTACAAAGGGGTGGCACA GTTCAGATCCAATTTCATAA |