Microexon ID Ps_NC_039361.1:31232636-31232638:+
Species Papaver somniferum
Coordinates NC_039361.1:31232636..31232638
Microexon Cluster ID MEP03
Size 3
Phase 0
Pfam Domain Motif CHORD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 54,3,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Ps_NC_039361.1:31232636-31232638:+ does not have available information here.
Transcript ID XM_026524499.1
Protein ID XP_026380284.1
Gene ID LOC113275066
Gene Name NA
Pfam domain motif CHORD
Motif E-value 4.9e-24
Motif start 8
Motif end 68
Protein seq >XP_026380284.1
MEKGSKVRCQRIGCDAMFTEDENTEDSCTYHASGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKHTTEKPVIVKAAP
KKPVPFVAPASTTSSKLDCSRCRQGFFCSEHGSQAKSNTTMPTSPVLPKCSTDVQEVTPPPAKKIININEPQTCRNKGCG
RTFKEKDNSDDACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFMEIPPCTKGWHSSDPIS*
CDS seq >XM_026524499.1
ATGGAGAAGGGATCTAAGGTGAGATGTCAGAGAATAGGGTGTGATGCAATGTTCACTGAGGATGAAAACACTGAAGATTC
TTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGTCATGATT
TCAGCTTATTTTTAGCGCTTCCAGGATGCAAGACAGGTAAGCATACAACGGAAAAACCCGTGATTGTAAAAGCTGCACCA
AAGAAGCCAGTTCCCTTTGTTGCTCCAGCAAGCACTACCTCATCAAAGCTGGATTGTTCAAGATGCCGACAAGGCTTCTT
TTGCTCAGAACATGGTTCACAAGCTAAATCAAACACAACTATGCCTACTTCTCCTGTGCTCCCCAAGTGCAGTACCGATG
TTCAGGAAGTCACACCCCCTCCTGCAAAAAAGATAATCAACATTAATGAACCTCAGACTTGCAGGAACAAAGGATGTGGT
AGAACCTTCAAAGAAAAGGACAACAGTGATGATGCATGTAGTTACCACCCTGGTCCTGCCGTTTTCCACGACAGGATGAG
AGGGTGGAAATGCTGCGATGTTCATGTGAAGGAGTTCGACGAGTTCATGGAAATACCTCCATGTACAAAGGGGTGGCACA
GTTCAGATCCAATTTCATAA
Microexon DNA seq GGG
Microexon Amino Acid seq G
Microexon-tag DNA Seq GCAATGTTCACTGAGGATGAAAACACTGAAGATTCTTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGT
Microexon-tag Amino Acid seq AMFTEDENTEDSCTYHASGPIFHDGTKEWSCCKQRS
Transcript ID XM_026524499.1
Gene ID Ps.23229
Gene Name NA
Pfam domain motif CHORD
Motif E-value 5e-24
Motif start 8
Motif end 68
Protein seq >XM_026524499.1
MEKGSKVRCQRIGCDAMFTEDENTEDSCTYHASGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKHTTEKPVIVKAAP
KKPVPFVAPASTTSSKLDCSRCRQGFFCSEHGSQAKSNTTMPTSPVLPKCSTDVQEVTPPPAKKIININEPQTCRNKGCG
RTFKEKDNSDDACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFMEIPPCTKGWHSSDPIS*
CDS seq >XM_026524499.1
ATGGAGAAGGGATCTAAGGTGAGATGTCAGAGAATAGGGTGTGATGCAATGTTCACTGAGGATGAAAACACTGAAGATTC
TTGTACATATCATGCATCTGGGCCAATATTTCACGATGGTACGAAAGAGTGGAGCTGCTGCAAGCAAAGGAGTCATGATT
TCAGCTTATTTTTAGCGCTTCCAGGATGCAAGACAGGTAAGCATACAACGGAAAAACCCGTGATTGTAAAAGCTGCACCA
AAGAAGCCAGTTCCCTTTGTTGCTCCAGCAAGCACTACCTCATCAAAGCTGGATTGTTCAAGATGCCGACAAGGCTTCTT
TTGCTCAGAACATGGTTCACAAGCTAAATCAAACACAACTATGCCTACTTCTCCTGTGCTCCCCAAGTGCAGTACCGATG
TTCAGGAAGTCACACCCCCTCCTGCAAAAAAGATAATCAACATTAATGAACCTCAGACTTGCAGGAACAAAGGATGTGGT
AGAACCTTCAAAGAAAAGGACAACAGTGATGATGCATGTAGTTACCACCCTGGTCCTGCCGTTTTCCACGACAGGATGAG
AGGGTGGAAATGCTGCGATGTTCATGTGAAGGAGTTCGACGAGTTCATGGAAATACCTCCATGTACAAAGGGGTGGCACA
GTTCAGATCCAATTTCATAA