
Microexon ID | Pp_14:6673647-6673649:- |
Species | Physcomitrium patens | Coordinates | 14:6673647..6673649 |
Microexon Cluster ID | MEP03 |
Size | 3 |
Phase | 0 |
Pfam Domain Motif | CHORD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 54,3,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Pp_14:6673647-6673649:- does not have available information here.
Transcript ID | Pp3c14_10540V3.2 |
Protein ID | Pp3c14_10540V3.2 |
Gene ID | Pp3c14_10540 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 6.6e-24 |
Motif start | 9 |
Motif end | 69 |
Protein seq | >Pp3c14_10540V3.2 MTTTTGRLRCQRIGCDEFFSPDNNLENSCTYHSGPPLFHDGGKEWSCCKQRSHDFSDFLSLPGCTKGKHSSEKPVVKAAP SPNARLPQPINTGNSALDAAKAACIRCRQGFFCSDHGAQQPTAGVAKPVPATTVQTAASESSGIVKKAVPSKVFDINAKQ VCKRKGCGNTFTEKDNHQEACNYHPGPAVFHDRLRGWKCCDVHVKEFDEFLEIPPCAKGWHDANPQDAA* |
CDS seq | >Pp3c14_10540V3.2 ATGACGACGACGACAGGAAGACTTCGATGCCAACGAATTGGCTGCGATGAGTTCTTCAGCCCCGACAACAACTTGGAGAA TTCCTGTACATATCACAGTGGGCCGCCTTTGTTTCACGATGGAGGGAAAGAGTGGAGCTGTTGTAAACAGCGCAGCCATG ACTTCAGCGATTTTTTAAGCCTGCCTGGATGCACAAAGGGAAAGCATTCATCTGAGAAGCCCGTAGTTAAGGCAGCTCCT AGTCCTAACGCTAGACTGCCGCAACCGATCAACACTGGTAACAGTGCTTTAGATGCCGCTAAAGCCGCATGTATACGATG TCGACAAGGGTTTTTCTGCTCCGATCATGGAGCTCAACAACCAACAGCTGGAGTTGCGAAGCCTGTTCCAGCAACCACTG TGCAGACCGCTGCCTCCGAAAGTTCAGGGATTGTAAAGAAGGCTGTGCCATCCAAGGTGTTCGATATAAATGCCAAACAA GTATGTAAACGCAAAGGTTGTGGCAACACGTTTACTGAGAAGGATAACCACCAAGAAGCTTGCAATTATCACCCTGGCCC TGCGGTGTTTCACGATCGACTTAGAGGGTGGAAATGTTGTGATGTGCATGTAAAAGAATTTGATGAGTTCCTGGAAATAC CCCCATGCGCCAAGGGTTGGCATGACGCCAATCCACAGGATGCGGCGTGA |
Microexon DNA seq | CCG |
Microexon Amino Acid seq | P |
Microexon-tag DNA Seq | GAGTTCTTCAGCCCCGACAACAACTTGGAGAATTCCTGTACATATCACAGTGGGCCGCCTTTGTTTCACGATGGAGGGAAAGAGTGGAGCTGTTGTAAACAGCGCAGC |
Microexon-tag Amino Acid seq | EFFSPDNNLENSCTYHSGPPLFHDGGKEWSCCKQRS |
Transcript ID | Pp3c14_10540V3.2 |
Gene ID | Pp.5714 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 6.7e-24 |
Motif start | 9 |
Motif end | 69 |
Protein seq | >Pp3c14_10540V3.2 MTTTTGRLRCQRIGCDEFFSPDNNLENSCTYHSGPPLFHDGGKEWSCCKQRSHDFSDFLSLPGCTKGKHSSEKPVVKAAP SPNARLPQPINTGNSALDAAKAACIRCRQGFFCSDHGAQQPTAGVAKPVPATTVQTAASESSGIVKKAVPSKVFDINAKQ VCKRKGCGNTFTEKDNHQEACNYHPGPAVFHDRLRGWKCCDVHVKEFDEFLEIPPCAKGWHDANPQDAA* |
CDS seq | >Pp3c14_10540V3.2 ATGACGACGACGACAGGAAGACTTCGATGCCAACGAATTGGCTGCGATGAGTTCTTCAGCCCCGACAACAACTTGGAGAA TTCCTGTACATATCACAGTGGGCCGCCTTTGTTTCACGATGGAGGGAAAGAGTGGAGCTGTTGTAAACAGCGCAGCCATG ACTTCAGCGATTTTTTAAGCCTGCCTGGATGCACAAAGGGAAAGCATTCATCTGAGAAGCCCGTAGTTAAGGCAGCTCCT AGTCCTAACGCTAGACTGCCGCAACCGATCAACACTGGTAACAGTGCTTTAGATGCCGCTAAAGCCGCATGTATACGATG TCGACAAGGGTTTTTCTGCTCCGATCATGGAGCTCAACAACCAACAGCTGGAGTTGCGAAGCCTGTTCCAGCAACCACTG TGCAGACCGCTGCCTCCGAAAGTTCAGGGATTGTAAAGAAGGCTGTGCCATCCAAGGTGTTCGATATAAATGCCAAACAA GTATGTAAACGCAAAGGTTGTGGCAACACGTTTACTGAGAAGGATAACCACCAAGAAGCTTGCAATTATCACCCTGGCCC TGCGGTGTTTCACGATCGACTTAGAGGGTGGAAATGTTGTGATGTGCATGTAAAAGAATTTGATGAGTTCCTGGAAATAC CCCCATGCGCCAAGGGTTGGCATGACGCCAATCCACAGGATGCGGCGTGA |