Microexon ID Pp_14:6673647-6673649:-
Species Physcomitrium patens
Coordinates 14:6673647..6673649
Microexon Cluster ID MEP03
Size 3
Phase 0
Pfam Domain Motif CHORD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 54,3,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Pp_14:6673647-6673649:- does not have available information here.
Transcript ID Pp3c14_10540V3.2
Protein ID Pp3c14_10540V3.2
Gene ID Pp3c14_10540
Gene Name NA
Pfam domain motif CHORD
Motif E-value 6.6e-24
Motif start 9
Motif end 69
Protein seq >Pp3c14_10540V3.2
MTTTTGRLRCQRIGCDEFFSPDNNLENSCTYHSGPPLFHDGGKEWSCCKQRSHDFSDFLSLPGCTKGKHSSEKPVVKAAP
SPNARLPQPINTGNSALDAAKAACIRCRQGFFCSDHGAQQPTAGVAKPVPATTVQTAASESSGIVKKAVPSKVFDINAKQ
VCKRKGCGNTFTEKDNHQEACNYHPGPAVFHDRLRGWKCCDVHVKEFDEFLEIPPCAKGWHDANPQDAA*
CDS seq >Pp3c14_10540V3.2
ATGACGACGACGACAGGAAGACTTCGATGCCAACGAATTGGCTGCGATGAGTTCTTCAGCCCCGACAACAACTTGGAGAA
TTCCTGTACATATCACAGTGGGCCGCCTTTGTTTCACGATGGAGGGAAAGAGTGGAGCTGTTGTAAACAGCGCAGCCATG
ACTTCAGCGATTTTTTAAGCCTGCCTGGATGCACAAAGGGAAAGCATTCATCTGAGAAGCCCGTAGTTAAGGCAGCTCCT
AGTCCTAACGCTAGACTGCCGCAACCGATCAACACTGGTAACAGTGCTTTAGATGCCGCTAAAGCCGCATGTATACGATG
TCGACAAGGGTTTTTCTGCTCCGATCATGGAGCTCAACAACCAACAGCTGGAGTTGCGAAGCCTGTTCCAGCAACCACTG
TGCAGACCGCTGCCTCCGAAAGTTCAGGGATTGTAAAGAAGGCTGTGCCATCCAAGGTGTTCGATATAAATGCCAAACAA
GTATGTAAACGCAAAGGTTGTGGCAACACGTTTACTGAGAAGGATAACCACCAAGAAGCTTGCAATTATCACCCTGGCCC
TGCGGTGTTTCACGATCGACTTAGAGGGTGGAAATGTTGTGATGTGCATGTAAAAGAATTTGATGAGTTCCTGGAAATAC
CCCCATGCGCCAAGGGTTGGCATGACGCCAATCCACAGGATGCGGCGTGA
Microexon DNA seq CCG
Microexon Amino Acid seq P
Microexon-tag DNA Seq GAGTTCTTCAGCCCCGACAACAACTTGGAGAATTCCTGTACATATCACAGTGGGCCGCCTTTGTTTCACGATGGAGGGAAAGAGTGGAGCTGTTGTAAACAGCGCAGC
Microexon-tag Amino Acid seq EFFSPDNNLENSCTYHSGPPLFHDGGKEWSCCKQRS
Transcript ID Pp3c14_10540V3.2
Gene ID Pp.5714
Gene Name NA
Pfam domain motif CHORD
Motif E-value 6.7e-24
Motif start 9
Motif end 69
Protein seq >Pp3c14_10540V3.2
MTTTTGRLRCQRIGCDEFFSPDNNLENSCTYHSGPPLFHDGGKEWSCCKQRSHDFSDFLSLPGCTKGKHSSEKPVVKAAP
SPNARLPQPINTGNSALDAAKAACIRCRQGFFCSDHGAQQPTAGVAKPVPATTVQTAASESSGIVKKAVPSKVFDINAKQ
VCKRKGCGNTFTEKDNHQEACNYHPGPAVFHDRLRGWKCCDVHVKEFDEFLEIPPCAKGWHDANPQDAA*
CDS seq >Pp3c14_10540V3.2
ATGACGACGACGACAGGAAGACTTCGATGCCAACGAATTGGCTGCGATGAGTTCTTCAGCCCCGACAACAACTTGGAGAA
TTCCTGTACATATCACAGTGGGCCGCCTTTGTTTCACGATGGAGGGAAAGAGTGGAGCTGTTGTAAACAGCGCAGCCATG
ACTTCAGCGATTTTTTAAGCCTGCCTGGATGCACAAAGGGAAAGCATTCATCTGAGAAGCCCGTAGTTAAGGCAGCTCCT
AGTCCTAACGCTAGACTGCCGCAACCGATCAACACTGGTAACAGTGCTTTAGATGCCGCTAAAGCCGCATGTATACGATG
TCGACAAGGGTTTTTCTGCTCCGATCATGGAGCTCAACAACCAACAGCTGGAGTTGCGAAGCCTGTTCCAGCAACCACTG
TGCAGACCGCTGCCTCCGAAAGTTCAGGGATTGTAAAGAAGGCTGTGCCATCCAAGGTGTTCGATATAAATGCCAAACAA
GTATGTAAACGCAAAGGTTGTGGCAACACGTTTACTGAGAAGGATAACCACCAAGAAGCTTGCAATTATCACCCTGGCCC
TGCGGTGTTTCACGATCGACTTAGAGGGTGGAAATGTTGTGATGTGCATGTAAAAGAATTTGATGAGTTCCTGGAAATAC
CCCCATGCGCCAAGGGTTGGCATGACGCCAATCCACAGGATGCGGCGTGA