
Microexon ID | Gm_20:39080152-39080154:- |
Species | Glycine max | Coordinates | 20:39080152..39080154 |
Microexon Cluster ID | MEP03 |
Size | 3 |
Phase | 0 |
Pfam Domain Motif | CHORD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 54,3,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGA |
Microexon Amino Acid seq | G |
Microexon-tag DNA Seq | GCCATGTTCTCCGAGGCCGACAACCCCGACGGTTCCTGTCGATACCATGATTCGGGACCTATATTTCATGATGGAACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGT |
Microexon-tag Amino Acid Seq | AMFSEADNPDGSCRYHDSGPIFHDGTKEWSCCKKRS |
Microexon-tag spanning region | 39079998-39082886 |
Microexon-tag prediction score | 0.9751 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRG91395x |
Reference Transcript ID | KRG91395 |
Gene ID | GLYMA_20G151900 |
Gene Name | NA |
Transcript ID | KRG91395 |
Protein ID | KRG91395 |
Gene ID | GLYMA_20G151900 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 5.1e-24 |
Motif start | 9 |
Motif end | 69 |
Protein seq | >KRG91395 MEKTAVKVRCQRIGCDAMFSEADNPDGSCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTVKQVITPVK KNTMPSPTAVSSTNASSKESCPRCRQGFFCSNHGSQSKPVNVVGDKAANLAGDVSADNNSSVEAPKPKKIVDINEAQVCK NKGCGQTFKEKDNHDTACNYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES* |
CDS seq | >KRG91395 ATGGAGAAGACAGCAGTTAAAGTTCGATGCCAGAGGATTGGGTGCGACGCCATGTTCTCCGAGGCCGACAACCCCGACGG TTCCTGTCGATACCATGATTCGGGACCTATATTTCATGATGGAACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATG ATTTTAGCTTGTTTTTGGAAATTCCAGGATGCAAGACAGGAAAACATACAACAGTTAAGCAAGTTATTACACCAGTGAAG AAGAACACCATGCCCTCTCCAACTGCTGTTTCTTCTACCAATGCATCATCAAAGGAGTCTTGTCCCAGATGTCGGCAGGG TTTCTTTTGCTCAAATCACGGCTCGCAAAGCAAACCTGTAAATGTTGTTGGAGACAAGGCTGCAAATCTTGCTGGAGATG TCTCTGCTGATAATAATTCAAGTGTTGAGGCTCCGAAACCTAAGAAGATAGTTGATATAAATGAAGCCCAAGTATGTAAA AATAAAGGATGCGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAACTACCATCCTGGCCCTGCTGTTTT TCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAGCATTCCTCCGTGTG CAAAGGGATGGCATAATGCGGATCCAGAGTCCTGA |
Microexon DNA seq | GGA |
Microexon Amino Acid seq | G |
Microexon-tag DNA Seq | ATGGGACCTATATTTCATGATGGAACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGT |
Microexon-tag Amino Acid seq | MGPIFHDGTKEWSCCKKRS |
Transcript ID | KRG91396 |
Gene ID | Gm.33831 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 1.1e-14 |
Motif start | 3 |
Motif end | 36 |
Protein seq | >KRG91396 MGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTVKQVITPVKKNTMPSPTAVSSTNASSKESCPRCRQGFFCSNH GSQSKPVNVVGDKAANLAGDVSADNNSSVEAPKPKKIVDINEAQVCKNKGCGQTFKEKDNHDTACNYHPGPAVFHDRMRG WKCCDIHVKEFDEFMSIPPCAKGWHNADPES* |
CDS seq | >KRG91396 ATGGGACCTATATTTCATGATGGAACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATGATTTTAGCTTGTTTTTGGA AATTCCAGGATGCAAGACAGGAAAACATACAACAGTTAAGCAAGTTATTACACCAGTGAAGAAGAACACCATGCCCTCTC CAACTGCTGTTTCTTCTACCAATGCATCATCAAAGGAGTCTTGTCCCAGATGTCGGCAGGGTTTCTTTTGCTCAAATCAC GGCTCGCAAAGCAAACCTGTAAATGTTGTTGGAGACAAGGCTGCAAATCTTGCTGGAGATGTCTCTGCTGATAATAATTC AAGTGTTGAGGCTCCGAAACCTAAGAAGATAGTTGATATAAATGAAGCCCAAGTATGTAAAAATAAAGGATGCGGTCAAA CTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAACTACCATCCTGGCCCTGCTGTTTTTCATGACCGGATGAGAGGG TGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAGCATTCCTCCGTGTGCAAAGGGATGGCATAATGC GGATCCAGAGTCCTGA |