
Microexon ID | Gm_10:47066312-47066314:+ |
Species | Glycine max | Coordinates | 10:47066312..47066314 |
Microexon Cluster ID | MEP03 |
Size | 3 |
Phase | 0 |
Pfam Domain Motif | CHORD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 54,3,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCYAYSTTCACCGARGAYGAYAAYCCYGAMGRYTCCTGYMVWTAYCAYGMYTCKGGACCTWTATTTCATGATGGWATGAAAGARTGGAGYTGYTGCAARMAAAGAAGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGA |
Microexon Amino Acid seq | G |
Microexon-tag DNA Seq | GCCATGTTCTCCGAGGACGACAACCCCGACGGTTGCTGTCGATACCATGATTCGGGACCTATATTTCATGACGGGACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGT |
Microexon-tag Amino Acid Seq | AMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRS |
Microexon-tag spanning region | 47064074-47066469 |
Microexon-tag prediction score | 0.9731 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH35422x |
Reference Transcript ID | KRH35422 |
Gene ID | GLYMA_10G242200 |
Gene Name | NA |
Transcript ID | KRH35422 |
Protein ID | KRH35422 |
Gene ID | GLYMA_10G242200 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 5.6e-23 |
Motif start | 9 |
Motif end | 69 |
Protein seq | >KRH35422 MEKTAVKVRCQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTVKQVITPVK KNTMPSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKPANIIGDKAANLAGDASVDNNSSVHAPKPKKIVDINEPQVCK NKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES* |
CDS seq | >KRH35422 ATGGAGAAGACAGCAGTTAAAGTTCGATGCCAGAGGATTGGGTGCGACGCCATGTTCTCCGAGGACGACAACCCCGACGG TTGCTGTCGATACCATGATTCGGGACCTATATTTCATGACGGGACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATG ATTTTAGCTTGTTTTTGGAAATTCCAGGATGCAAGACAGGAAAACATACAACAGTTAAGCAAGTAATTACACCAGTGAAG AAGAACACCATGCCTTCTCCAACCGCTGTTTGTTCAACCAATGCATCATCAAAGGACTCTTGTCCCAGATGTCAGCAGGG TTTCTTTTGCTCAGATCATGGCTCACAAAGCAAACCTGCAAATATTATTGGAGACAAGGCCGCAAATCTGGCTGGAGATG CATCTGTTGATAACAATTCAAGTGTTCATGCTCCGAAACCTAAGAAGATAGTTGATATAAATGAGCCACAAGTATGTAAA AATAAAGGATGCGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAGCTACCACCCTGGCCCTGCTGTTTT TCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAGCATTCCTCCGTGCG CAAAGGGATGGCATAATGCGGATCCAGAGTCCTGA |
Microexon DNA seq | GGA |
Microexon Amino Acid seq | G |
Microexon-tag DNA Seq | GCCATGTTCTCCGAGGACGACAACCCCGACGGTTGCTGTCGATACCATGATTCGGGACCTATATTTCATGACGGGACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGT |
Microexon-tag Amino Acid seq | AMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRS |
Transcript ID | KRH35422 |
Gene ID | Gm.4727 |
Gene Name | NA |
Pfam domain motif | CHORD |
Motif E-value | 5.6e-23 |
Motif start | 9 |
Motif end | 69 |
Protein seq | >KRH35422 MEKTAVKVRCQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTVKQVITPVK KNTMPSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKPANIIGDKAANLAGDASVDNNSSVHAPKPKKIVDINEPQVCK NKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES* |
CDS seq | >KRH35422 ATGGAGAAGACAGCAGTTAAAGTTCGATGCCAGAGGATTGGGTGCGACGCCATGTTCTCCGAGGACGACAACCCCGACGG TTGCTGTCGATACCATGATTCGGGACCTATATTTCATGACGGGACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATG ATTTTAGCTTGTTTTTGGAAATTCCAGGATGCAAGACAGGAAAACATACAACAGTTAAGCAAGTAATTACACCAGTGAAG AAGAACACCATGCCTTCTCCAACCGCTGTTTGTTCAACCAATGCATCATCAAAGGACTCTTGTCCCAGATGTCAGCAGGG TTTCTTTTGCTCAGATCATGGCTCACAAAGCAAACCTGCAAATATTATTGGAGACAAGGCCGCAAATCTGGCTGGAGATG CATCTGTTGATAACAATTCAAGTGTTCATGCTCCGAAACCTAAGAAGATAGTTGATATAAATGAGCCACAAGTATGTAAA AATAAAGGATGCGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAGCTACCACCCTGGCCCTGCTGTTTT TCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAGCATTCCTCCGTGCG CAAAGGGATGGCATAATGCGGATCCAGAGTCCTGA |