Microexon ID Vv_8:17011650:+
Species Vistis vinifera
Coordinates 8:17011650..17011650
Microexon Cluster ID MEP02
Size 1
Phase 1
Pfam Domain Motif Vps55
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCCATGACGATCGAAGTCCTTGCTGGTCTTGCTTTTATGTTTTCATCCAGTATCCTGCTGCAGATCCTG
Microexon-tag Amino Acid Seq MAMTIEVLAGLAFMFSSSILLQIL
Microexon-tag spanning region17010182-17011799
Microexon-tag prediction score0.9688
Overlapped with the annotated transcript (%) 62.35
New Transcript ID VIT_08s0007g02930.t01x
Reference Transcript ID VIT_08s0007g02930.t01
Gene ID VIT_08s0007g02930
Gene Name NA
Vv_8:17011650:+ does not have available information here.
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCCATGACGATCGAAGTCCTTGCTGGTCTTGCTTTTATGTTTTCATCCAGTATCCTGCTGCAGATCCTG
Microexon-tag Amino Acid seq MAMTIEVLAGLAFMFSSSILLQIL
Transcript ID Vv.31063.1
Gene ID Vv.31063
Gene Name NA
Pfam domain motif Vps55
Motif E-value 1.3e-32
Motif start 9
Motif end 120
Protein seq >Vv.31063.1
MAMTIEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYILVPMPCLFFGGGSTQFLTSRDGGGWIDAAKFLTGASAV
GSIAIPIILRHADLIGNGAMWIEFFSFLVFVCTVMCFHHANLEDEW*
CDS seq >Vv.31063.1
ATGGCCATGACGATCGAAGTCCTTGCTGGTCTTGCTTTTATGTTTTCATCCAGTATCCTGCTGCAGATCCTGGCTTGTGC
ACTATACAACAACTGGTGGCCAATGTTATCAGCTCTCATGTATATACTGGTGCCTATGCCTTGTTTGTTCTTTGGGGGTG
GTTCCACTCAATTCTTAACCAGCCGAGATGGTGGGGGTTGGATAGATGCGGCTAAGTTCTTAACAGGGGCATCAGCAGTG
GGGAGCATAGCCATTCCTATTATCCTTAGGCATGCTGATCTGATAGGGAATGGAGCTATGTGGATTGAGTTCTTCTCCTT
CCTCGTATTTGTCTGCACTGTCATGTGTTTTCATCATGCTAACCTTGAAGATGAATGGTGA