
Microexon ID | Vv_8:17011650:+ |
Species | Vistis vinifera | Coordinates | 8:17011650..17011650 |
Microexon Cluster ID | MEP02 |
Size | 1 |
Phase | 1 |
Pfam Domain Motif | Vps55 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,1,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | T |
Microexon Amino Acid seq | V |
Microexon-tag DNA Seq | ATGGCCATGACGATCGAAGTCCTTGCTGGTCTTGCTTTTATGTTTTCATCCAGTATCCTGCTGCAGATCCTG |
Microexon-tag Amino Acid Seq | MAMTIEVLAGLAFMFSSSILLQIL |
Microexon-tag spanning region | 17010182-17011799 |
Microexon-tag prediction score | 0.9688 |
Overlapped with the annotated transcript (%) | 62.35 |
New Transcript ID | VIT_08s0007g02930.t01x |
Reference Transcript ID | VIT_08s0007g02930.t01 |
Gene ID | VIT_08s0007g02930 |
Gene Name | NA |
Vv_8:17011650:+ does not have available information here.
Microexon DNA seq | T |
Microexon Amino Acid seq | V |
Microexon-tag DNA Seq | ATGGCCATGACGATCGAAGTCCTTGCTGGTCTTGCTTTTATGTTTTCATCCAGTATCCTGCTGCAGATCCTG |
Microexon-tag Amino Acid seq | MAMTIEVLAGLAFMFSSSILLQIL |
Transcript ID | Vv.31063.1 |
Gene ID | Vv.31063 |
Gene Name | NA |
Pfam domain motif | Vps55 |
Motif E-value | 1.3e-32 |
Motif start | 9 |
Motif end | 120 |
Protein seq | >Vv.31063.1 MAMTIEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYILVPMPCLFFGGGSTQFLTSRDGGGWIDAAKFLTGASAV GSIAIPIILRHADLIGNGAMWIEFFSFLVFVCTVMCFHHANLEDEW* |
CDS seq | >Vv.31063.1 ATGGCCATGACGATCGAAGTCCTTGCTGGTCTTGCTTTTATGTTTTCATCCAGTATCCTGCTGCAGATCCTGGCTTGTGC ACTATACAACAACTGGTGGCCAATGTTATCAGCTCTCATGTATATACTGGTGCCTATGCCTTGTTTGTTCTTTGGGGGTG GTTCCACTCAATTCTTAACCAGCCGAGATGGTGGGGGTTGGATAGATGCGGCTAAGTTCTTAACAGGGGCATCAGCAGTG GGGAGCATAGCCATTCCTATTATCCTTAGGCATGCTGATCTGATAGGGAATGGAGCTATGTGGATTGAGTTCTTCTCCTT CCTCGTATTTGTCTGCACTGTCATGTGTTTTCATCATGCTAACCTTGAAGATGAATGGTGA |