Microexon ID Ta_Un:42181890:-
Species Triticum   Aestivum
Coordinates Un:42181890..42181890
Microexon Cluster ID MEP02
Size 1
Phase 1
Pfam Domain Motif Vps55
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCGATGACCGTGGAAGTGCTCGCTGGACTTGCGTGTATGTTCTCCACCAGCGTTCTTTTGCAAATCCTG
Microexon-tag Amino Acid Seq MAMTVEVLAGLACMFSTSVLLQIL
Microexon-tag spanning region42181757-42182879
Microexon-tag prediction score0.9699
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCSU02G053300.1x
Reference Transcript ID TraesCSU02G053300.1
Gene ID TraesCSU02G053300
Gene Name NA
Transcript ID TraesCSU02G053300.1
Protein ID
Gene ID TraesCSU02G053300
Gene Name
Pfam domain motif Vps55
Motif E-value 4.70E-31
Motif start 9
Motif end 120
Protein seq >TraesCSU02G053300.1
MAMTVEVLAGLACMFSTSVLLQILACALYNNWWPMLAALMYIIVPMPCLFFGDGSTRFLSSGEGGAWMKAAKFLTGMSAM
GSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRATLDEEW*
CDS seq >TraesCSU02G053300.1
ATGGCGATGACCGTGGAAGTGCTCGCTGGACTTGCGTGTATGTTCTCCACCAGCGTTCTTTTGCAAATCCTGGCATGTGC
TTTGTACAACAACTGGTGGCCTATGTTAGCAGCACTCATGTATATCATTGTGCCAATGCCATGCCTGTTCTTTGGCGACG
GATCCACACGGTTCTTGAGTAGCGGAGAGGGTGGAGCGTGGATGAAAGCAGCCAAGTTCCTGACCGGCATGTCTGCCATG
GGAAGCCTCGCAATCCCGGCGATCCTGAGGCATGCTGGCCTGATCGAGACGGGGGCCATGTTCATCGAGTTCACGTCCTT
CTTCATCCTCGTGTGCACGGTGCTGTGCTTCCACAGGGCTACCCTGGACGAGGAGTGGTAA
Ta_Un:42181890:- does not have available information here.