Microexon ID Ps_NW_020628818.1:7860999:+
Species Papaver somniferum
Coordinates NW_020628818.1:7860999..7860999
Microexon Cluster ID MEP02
Size 1
Phase 1
Pfam Domain Motif Vps55
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCTATGTCGGTCGAAGTGCTTGCAGGGCTGGCTTTCATGTTCTCAGCTAGCATTTTATTGCAAATTCTG
Microexon-tag Amino Acid Seq MAMSVEVLAGLAFMFSASILLQIL
Microexon-tag spanning region7860534-7862316
Microexon-tag prediction score0.9552
Overlapped with the annotated transcript (%) 98.61
New Transcript ID XM_026584444.1x
Reference Transcript ID XM_026584444.1
Gene ID NA
Gene Name NA
Ps_NW_020628818.1:7860999:+ does not have available information here.
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCTATGTCGGTCGAAGTGCTTGCAGGGCTGGCTTTCATGTTCTCAGCTAGCATTTTATTGCAAATTCTG
Microexon-tag Amino Acid seq MAMSVEVLAGLAFMFSASILLQIL
Transcript ID Ps.78178.1
Gene ID Ps.78178
Gene Name NA
Pfam domain motif Vps55
Motif E-value 4e-31
Motif start 9
Motif end 120
Protein seq >Ps.78178.1
MAMSVEVLAGLAFMFSASILLQILACAIYSNWWPMLAALMYVMVPMPCLFFGGGSTAFLTSRDGGGWMDAAKFLTGASAV
GSIAIPAILRHAGLIETGAMFIEFTSFFILVCTIMCFHRASLEDEW*
CDS seq >Ps.78178.1
ATGGCTATGTCGGTCGAAGTGCTTGCAGGGCTGGCTTTCATGTTCTCAGCTAGCATTTTATTGCAAATTCTGGCCTGTGC
AATATACAGCAACTGGTGGCCAATGTTGGCAGCTCTGATGTACGTAATGGTGCCTATGCCTTGTTTGTTTTTTGGTGGTG
GATCCACTGCATTCTTAACCAGCCGTGATGGTGGAGGCTGGATGGATGCTGCAAAGTTCTTGACAGGAGCATCTGCAGTG
GGAAGCATCGCCATTCCTGCAATCCTTAGGCATGCTGGTCTGATCGAAACAGGAGCTATGTTCATTGAGTTCACTTCTTT
CTTCATTCTAGTTTGCACTATCATGTGTTTTCATCGTGCTAGTCTTGAAGATGAATGGTGA