Microexon ID Ps_NC_039366.1:124414579:-
Species Papaver somniferum
Coordinates NC_039366.1:124414579..124414579
Microexon Cluster ID MEP02
Size 1
Phase 1
Pfam Domain Motif Vps55
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCTATGTCGGTCGAAGTGCTTGCAGGGCTGGCTTTCATGTTCTCAGCTAGCATTTTGTTGCAAATTCTG
Microexon-tag Amino Acid Seq MAMSVEVLAGLAFMFSASILLQIL
Microexon-tag spanning region124413277-124415017
Microexon-tag prediction score0.9604
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Ps_NC_039366.1:124414579:- does not have available information here.
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCTATGTCGGTCGAAGTGCTTGCAGGGCTGGCTTTCATGTTCTCAGCTAGCATTTTGTTGCAAATTCTG
Microexon-tag Amino Acid seq MAMSVEVLAGLAFMFSASILLQIL
Transcript ID Ps.57094.1
Gene ID Ps.57094
Gene Name NA
Pfam domain motif Vps55
Motif E-value 4e-31
Motif start 9
Motif end 120
Protein seq >Ps.57094.1
MAMSVEVLAGLAFMFSASILLQILACAIYSNWWPMLAALMYVMVPMPCLFFGGGSTAFLTSRDGGGWMDAAKFLTGASAV
GSIAIPAILRHAGLIETGAMFIEFTSFFILVCTIMCFHRASLEDEW*
CDS seq >Ps.57094.1
ATGGCTATGTCGGTCGAAGTGCTTGCAGGGCTGGCTTTCATGTTCTCAGCTAGCATTTTGTTGCAAATTCTGGCCTGTGC
AATTTACAGCAACTGGTGGCCGATGTTGGCAGCGCTCATGTACGTGATGGTACCTATGCCTTGTTTATTTTTTGGTGGTG
GATCCACTGCATTCTTAACCAGCCGTGATGGTGGAGGCTGGATGGATGCTGCGAAGTTCTTGACAGGAGCATCCGCAGTA
GGAAGCATCGCCATTCCTGCAATCCTTAGGCATGCTGGTCTGATCGAAACAGGAGCTATGTTCATTGAGTTCACTTCTTT
CTTCATTCTTGTTTGCACTATCATGTGTTTTCATCGTGCTAGTCTTGAAGATGAATGGTGA