
Microexon ID | Ha_13:21911334:+ |
Species | Helianthus annuus | Coordinates | 13:21911334..21911334 |
Microexon Cluster ID | MEP02 |
Size | 1 |
Phase | 1 |
Pfam Domain Motif | Vps55 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,1,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ha_13:21911334:+ does not have available information here.
Ha_13:21911334:+ does not have available information here.
Microexon DNA seq | T |
Microexon Amino Acid seq | V |
Microexon-tag DNA Seq | ATGGCGATGACAGTTGAAGTGCTTGCTGGACTTGCTCTTATGTTTTCGTCTAGTCTCCTCTTACAAATCCTG |
Microexon-tag Amino Acid seq | MAMTVEVLAGLALMFSSSLLLQIL |
Transcript ID | Ha.14597.1 |
Gene ID | Ha.14597 |
Gene Name | NA |
Pfam domain motif | Vps55 |
Motif E-value | 6.9e-32 |
Motif start | 9 |
Motif end | 120 |
Protein seq | >Ha.14597.1 MAMTVEVLAGLALMFSSSLLLQILACAIYNNWWPMLSALMYVLVPMPCMFFGGGSTEYLLSRDGGGWIDAAKFLTGASAV GSIAIPIILRHAHLISTGAMMIEFMSFFIFVGTVMCFHRANLEDEW* |
CDS seq | >Ha.14597.1 ATGGCGATGACAGTTGAAGTGCTTGCTGGACTTGCTCTTATGTTTTCGTCTAGTCTCCTCTTACAAATCCTGGCTTGTGC AATATACAACAACTGGTGGCCGATGTTATCAGCACTCATGTATGTTTTGGTGCCTATGCCGTGCATGTTCTTTGGTGGTG GATCCACTGAATATTTACTCTCCCGGGATGGTGGCGGGTGGATAGATGCTGCCAAATTCCTAACTGGTGCTTCAGCTGTA GGGAGCATAGCCATCCCCATCATCTTAAGGCATGCACATCTAATCAGCACCGGAGCTATGATGATCGAATTCATGTCATT TTTCATATTTGTGGGCACCGTCATGTGCTTTCATCGTGCTAATCTTGAAGATGAATGGTGA |