Microexon ID Ha_13:21911334:+
Species Helianthus annuus
Coordinates 13:21911334..21911334
Microexon Cluster ID MEP02
Size 1
Phase 1
Pfam Domain Motif Vps55
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Ha_13:21911334:+ does not have available information here.
Ha_13:21911334:+ does not have available information here.
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCGATGACAGTTGAAGTGCTTGCTGGACTTGCTCTTATGTTTTCGTCTAGTCTCCTCTTACAAATCCTG
Microexon-tag Amino Acid seq MAMTVEVLAGLALMFSSSLLLQIL
Transcript ID Ha.14597.1
Gene ID Ha.14597
Gene Name NA
Pfam domain motif Vps55
Motif E-value 6.9e-32
Motif start 9
Motif end 120
Protein seq >Ha.14597.1
MAMTVEVLAGLALMFSSSLLLQILACAIYNNWWPMLSALMYVLVPMPCMFFGGGSTEYLLSRDGGGWIDAAKFLTGASAV
GSIAIPIILRHAHLISTGAMMIEFMSFFIFVGTVMCFHRANLEDEW*
CDS seq >Ha.14597.1
ATGGCGATGACAGTTGAAGTGCTTGCTGGACTTGCTCTTATGTTTTCGTCTAGTCTCCTCTTACAAATCCTGGCTTGTGC
AATATACAACAACTGGTGGCCGATGTTATCAGCACTCATGTATGTTTTGGTGCCTATGCCGTGCATGTTCTTTGGTGGTG
GATCCACTGAATATTTACTCTCCCGGGATGGTGGCGGGTGGATAGATGCTGCCAAATTCCTAACTGGTGCTTCAGCTGTA
GGGAGCATAGCCATCCCCATCATCTTAAGGCATGCACATCTAATCAGCACCGGAGCTATGATGATCGAATTCATGTCATT
TTTCATATTTGTGGGCACCGTCATGTGCTTTCATCGTGCTAATCTTGAAGATGAATGGTGA