
Microexon ID | Gm_3:40737789:- |
Species | Glycine max | Coordinates | 3:40737789..40737789 |
Microexon Cluster ID | MEP02 |
Size | 1 |
Phase | 1 |
Pfam Domain Motif | Vps55 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,1,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | T |
Microexon Amino Acid seq | V |
Microexon-tag DNA Seq | ATGGCGATGACTGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG |
Microexon-tag Amino Acid Seq | MAMTVHVLAGLAFMFSASILLQIL |
Microexon-tag spanning region | 40737637-40738841 |
Microexon-tag prediction score | 0.9536 |
Overlapped with the annotated transcript (%) | 5.98 |
New Transcript ID | KRH67953x |
Reference Transcript ID | KRH67953 |
Gene ID | GLYMA_03G198000 |
Gene Name | NA |
Gm_3:40737789:- does not have available information here.
Microexon DNA seq | T |
Microexon Amino Acid seq | V |
Microexon-tag DNA Seq | ATGGCGATGACTGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG |
Microexon-tag Amino Acid seq | MAMTVHVLAGLAFMFSASILLQIL |
Transcript ID | Gm.36659.1 |
Gene ID | Gm.36659 |
Gene Name | NA |
Pfam domain motif | Vps55 |
Motif E-value | 1.6e-31 |
Motif start | 9 |
Motif end | 119 |
Protein seq | >Gm.36659.1 MAMTVHVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAV GSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQAGLDDDW* |
CDS seq | >Gm.36659.1 ATGGCGATGACTGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGC AATATATAACAATTGGTGGCCAATGTTATCAGCTCTGATGTATGTGCTGGTTCCTATGCCTTGCTTATTCTTTGGAGGTG GATCCACTCAATTTCTAATGAGCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCTGTT GGGAGCATAGCCATTCCTATAATCCTCAAGCACGCTCATATGATTGAGACAGGCGCGATGCTCATTGAACTTGTATCGTT CTTCATTTTTATATGTACTGTTTTATGTTTCCACCAAGCCGGCCTTGATGATGATTGGTAA |