Microexon ID Gm_3:40737789:-
Species Glycine max
Coordinates 3:40737789..40737789
Microexon Cluster ID MEP02
Size 1
Phase 1
Pfam Domain Motif Vps55
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCGATGACTGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG
Microexon-tag Amino Acid Seq MAMTVHVLAGLAFMFSASILLQIL
Microexon-tag spanning region40737637-40738841
Microexon-tag prediction score0.9536
Overlapped with the annotated transcript (%) 5.98
New Transcript ID KRH67953x
Reference Transcript ID KRH67953
Gene ID GLYMA_03G198000
Gene Name NA
Gm_3:40737789:- does not have available information here.
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCGATGACTGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG
Microexon-tag Amino Acid seq MAMTVHVLAGLAFMFSASILLQIL
Transcript ID Gm.36659.1
Gene ID Gm.36659
Gene Name NA
Pfam domain motif Vps55
Motif E-value 1.6e-31
Motif start 9
Motif end 119
Protein seq >Gm.36659.1
MAMTVHVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAV
GSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQAGLDDDW*
CDS seq >Gm.36659.1
ATGGCGATGACTGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGC
AATATATAACAATTGGTGGCCAATGTTATCAGCTCTGATGTATGTGCTGGTTCCTATGCCTTGCTTATTCTTTGGAGGTG
GATCCACTCAATTTCTAATGAGCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCTGTT
GGGAGCATAGCCATTCCTATAATCCTCAAGCACGCTCATATGATTGAGACAGGCGCGATGCTCATTGAACTTGTATCGTT
CTTCATTTTTATATGTACTGTTTTATGTTTCCACCAAGCCGGCCTTGATGATGATTGGTAA