
Microexon ID | Gm_19:45306503:- |
Species | Glycine max | Coordinates | 19:45306503..45306503 |
Microexon Cluster ID | MEP02 |
Size | 1 |
Phase | 1 |
Pfam Domain Motif | Vps55 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,1,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | T |
Microexon Amino Acid seq | V |
Microexon-tag DNA Seq | ATGGCGATGACAGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG |
Microexon-tag Amino Acid Seq | MAMTVHVLAGLAFMFSASILLQIL |
Microexon-tag spanning region | 45306352-45307372 |
Microexon-tag prediction score | 0.9569 |
Overlapped with the annotated transcript (%) | 7.05 |
New Transcript ID | KRG96210x |
Reference Transcript ID | KRG96210 |
Gene ID | GLYMA_19G195900 |
Gene Name | NA |
Gm_19:45306503:- does not have available information here.
Microexon DNA seq | T |
Microexon Amino Acid seq | V |
Microexon-tag DNA Seq | ATGGCGATGACAGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG |
Microexon-tag Amino Acid seq | MAMTVHVLAGLAFMFSASILLQIL |
Transcript ID | Gm.28685.1 |
Gene ID | Gm.28685 |
Gene Name | NA |
Pfam domain motif | Vps55 |
Motif E-value | 2e-31 |
Motif start | 9 |
Motif end | 120 |
Protein seq | >Gm.28685.1 MAMTVHVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMTRDGGGWIDAAKFLTGASAV GSLAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW* |
CDS seq | >Gm.28685.1 ATGGCGATGACAGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGC AATATATAACAATTGGTGGCCAATGTTATCAGCTCTGATGTATGTGCTGGTTCCTATGCCTTGCTTATTCTTTGGAGGTG GATCCACTCAATTTCTAATGACCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCTGTT GGGAGCTTAGCCATTCCTATCATTCTCAAGCACGCTCATATGATTGAGACAGGCGCGATGCTCATTGAGCTTGTATCATT CTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAGCCTTGATGATGATTGGTAA |