Microexon ID Gm_19:45306503:-
Species Glycine max
Coordinates 19:45306503..45306503
Microexon Cluster ID MEP02
Size 1
Phase 1
Pfam Domain Motif Vps55
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGGCGATGACMRTYGAAGTGCTTGCTGGRCTTGCTTTYATGTTYTCADCBAGYATYYTGYTRCARATMCTG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCGATGACAGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG
Microexon-tag Amino Acid Seq MAMTVHVLAGLAFMFSASILLQIL
Microexon-tag spanning region45306352-45307372
Microexon-tag prediction score0.9569
Overlapped with the annotated transcript (%) 7.05
New Transcript ID KRG96210x
Reference Transcript ID KRG96210
Gene ID GLYMA_19G195900
Gene Name NA
Gm_19:45306503:- does not have available information here.
Microexon DNA seq T
Microexon Amino Acid seq V
Microexon-tag DNA Seq ATGGCGATGACAGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTG
Microexon-tag Amino Acid seq MAMTVHVLAGLAFMFSASILLQIL
Transcript ID Gm.28685.1
Gene ID Gm.28685
Gene Name NA
Pfam domain motif Vps55
Motif E-value 2e-31
Motif start 9
Motif end 120
Protein seq >Gm.28685.1
MAMTVHVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMTRDGGGWIDAAKFLTGASAV
GSLAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW*
CDS seq >Gm.28685.1
ATGGCGATGACAGTACACGTCCTTGCTGGGTTGGCTTTTATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGC
AATATATAACAATTGGTGGCCAATGTTATCAGCTCTGATGTATGTGCTGGTTCCTATGCCTTGCTTATTCTTTGGAGGTG
GATCCACTCAATTTCTAATGACCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCTGTT
GGGAGCTTAGCCATTCCTATCATTCTCAAGCACGCTCATATGATTGAGACAGGCGCGATGCTCATTGAGCTTGTATCATT
CTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAGCCTTGATGATGATTGGTAA