
Microexon ID | Sm_GL377656:381484:+ |
Species | Selaginella moellendorffii | Coordinates | GL377656:381484..381484 |
Microexon Cluster ID | MEP01 |
Size | 1 |
Phase | 1 |
Pfam Domain Motif | zf-ANAPC11 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,1,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATGAARGTCAARMTYYTGCARTGGCATGCTGTTGCTTCWTGGACWTGGGATGCWCARGATGARACATGTGGS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | A |
Microexon Amino Acid seq | K |
Microexon-tag DNA Seq | ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGATGCGCACGACGACGCCTGTGGG |
Microexon-tag Amino Acid Seq | MKVKVLKWHAVASWTWDAHDDACG |
Microexon-tag spanning region | 381370-381590 |
Microexon-tag prediction score | 0.9361 |
Overlapped with the annotated transcript (%) | 58.43 |
New Transcript ID | EFJ10063x |
Reference Transcript ID | EFJ10063 |
Gene ID | SELMODRAFT_128698 |
Gene Name | NA |
Sm_GL377656:381484:+ does not have available information here.
Microexon DNA seq | A |
Microexon Amino Acid seq | K |
Microexon-tag DNA Seq | ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGATGCGCACGACGACGCCTGTGGG |
Microexon-tag Amino Acid seq | MKVKVLKWHAVASWTWDAHDDACG |
Transcript ID | Sm.27222.1 |
Gene ID | Sm.27222 |
Gene Name | NA |
Pfam domain motif | zf-ANAPC11 |
Motif E-value | 5.4e-40 |
Motif start | 1 |
Motif end | 82 |
Protein seq | >Sm.27222.1 MKVKVLKWHAVASWTWDAHDDACGICRMAFDGCCPDCKMPGDDCPLIWGACNHAFHLHCILKWVNSQSPRPQCPMCRREW KYRA* |
CDS seq | >Sm.27222.1 ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGATGCGCACGACGACGCCTGTGGGATTTGCCG AATGGCGTTTGATGGATGCTGCCCGGATTGCAAGATGCCCGGCGACGATTGCCCTCTCATTTGGGGAGCTTGCAATCACG CGTTCCACCTCCATTGTATTCTCAAGTGGGTGAACTCGCAGAGCCCCCGACCACAGTGTCCTATGTGTCGCAGGGAGTGG AAGTATAGAGCATGA |