
Microexon ID | Sm_GL377569:2902907:- |
Species | Selaginella moellendorffii | Coordinates | GL377569:2902907..2902907 |
Microexon Cluster ID | MEP01 |
Size | 1 |
Phase | 1 |
Pfam Domain Motif | zf-ANAPC11 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,1,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATGAARGTCAARMTYYTGCARTGGCATGCTGTTGCTTCWTGGACWTGGGATGCWCARGATGARACATGTGGS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | A |
Microexon Amino Acid seq | K |
Microexon-tag DNA Seq | ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGACGCGCACGACGACGCCTGTGGG |
Microexon-tag Amino Acid Seq | MKVKVLKWHAVASWTWDAHDDACG |
Microexon-tag spanning region | 2902799-2903020 |
Microexon-tag prediction score | 0.9324 |
Overlapped with the annotated transcript (%) | 58.43 |
New Transcript ID | EFJ34927x |
Reference Transcript ID | EFJ34927 |
Gene ID | SELMODRAFT_39470 |
Gene Name | NA |
Sm_GL377569:2902907:- does not have available information here.
Microexon DNA seq | A |
Microexon Amino Acid seq | K |
Microexon-tag DNA Seq | ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGACGCGCACGACGACGCCTGTGGG |
Microexon-tag Amino Acid seq | MKVKVLKWHAVASWTWDAHDDACG |
Transcript ID | Sm.4159.1 |
Gene ID | Sm.4159 |
Gene Name | NA |
Pfam domain motif | zf-ANAPC11 |
Motif E-value | 5.4e-40 |
Motif start | 1 |
Motif end | 82 |
Protein seq | >Sm.4159.1 MKVKVLKWHAVASWTWDAHDDACGICRMAFDGCCPDCKMPGDDCPLIWGACNHAFHLHCILKWVNSQSPRPQCPMCRREW KYRA* |
CDS seq | >Sm.4159.1 ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGACGCGCACGACGACGCCTGTGGGATTTGCCG AATGGCGTTTGATGGATGCTGCCCGGATTGCAAGATGCCCGGCGACGATTGCCCTCTCATTTGGGGAGCTTGCAATCACG CGTTCCACCTCCATTGTATTCTCAAGTGGGTGAACTCGCAGAGCCCCCGACCACAGTGTCCTATGTGTCGCAGGGAGTGG AAGTATAGAGCATGA |