Microexon ID Sm_GL377569:2902907:-
Species Selaginella moellendorffii
Coordinates GL377569:2902907..2902907
Microexon Cluster ID MEP01
Size 1
Phase 1
Pfam Domain Motif zf-ANAPC11
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGAARGTCAARMTYYTGCARTGGCATGCTGTTGCTTCWTGGACWTGGGATGCWCARGATGARACATGTGGS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq A
Microexon Amino Acid seq K
Microexon-tag DNA Seq ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGACGCGCACGACGACGCCTGTGGG
Microexon-tag Amino Acid Seq MKVKVLKWHAVASWTWDAHDDACG
Microexon-tag spanning region2902799-2903020
Microexon-tag prediction score0.9324
Overlapped with the annotated transcript (%) 58.43
New Transcript ID EFJ34927x
Reference Transcript ID EFJ34927
Gene ID SELMODRAFT_39470
Gene Name NA
Sm_GL377569:2902907:- does not have available information here.
Microexon DNA seq A
Microexon Amino Acid seq K
Microexon-tag DNA Seq ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGACGCGCACGACGACGCCTGTGGG
Microexon-tag Amino Acid seq MKVKVLKWHAVASWTWDAHDDACG
Transcript ID Sm.4159.1
Gene ID Sm.4159
Gene Name NA
Pfam domain motif zf-ANAPC11
Motif E-value 5.4e-40
Motif start 1
Motif end 82
Protein seq >Sm.4159.1
MKVKVLKWHAVASWTWDAHDDACGICRMAFDGCCPDCKMPGDDCPLIWGACNHAFHLHCILKWVNSQSPRPQCPMCRREW
KYRA*
CDS seq >Sm.4159.1
ATGAAGGTGAAGGTGCTGAAATGGCACGCTGTGGCTTCTTGGACATGGGACGCGCACGACGACGCCTGTGGGATTTGCCG
AATGGCGTTTGATGGATGCTGCCCGGATTGCAAGATGCCCGGCGACGATTGCCCTCTCATTTGGGGAGCTTGCAATCACG
CGTTCCACCTCCATTGTATTCTCAAGTGGGTGAACTCGCAGAGCCCCCGACCACAGTGTCCTATGTGTCGCAGGGAGTGG
AAGTATAGAGCATGA