
Microexon ID | At_3:1754312:+ |
Species | Arabidopsis thaliana | Coordinates | 3:1754312..1754312 |
Microexon Cluster ID | MEP01 |
Size | 1 |
Phase | 1 |
Pfam Domain Motif | zf-ANAPC11 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 19,1,52 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATGAARGTCAARMTYYTGCARTGGCATGCTGTTGCTTCWTGGACWTGGGATGCWCARGATGARACATGTGGS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | A |
Microexon Amino Acid seq | Q |
Microexon-tag DNA Seq | ATGAAAGTCAAGATCTTGCAATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGG |
Microexon-tag Amino Acid Seq | MKVKILQWHAVASWTWDAQDETCG |
Microexon-tag spanning region | 1753961-1754453 |
Microexon-tag prediction score | 0.986 |
Overlapped with the annotated transcript (%) | 86.59 |
New Transcript ID | AT3G05870.1x |
Reference Transcript ID | AT3G05870.1 |
Gene ID | AT3G05870 |
Gene Name | APC11 |
At_3:1754312:+ does not have available information here.
Microexon DNA seq | A |
Microexon Amino Acid seq | Q |
Microexon-tag DNA Seq | ATGAAAGTCAAGATCTTGCAATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGG |
Microexon-tag Amino Acid seq | MKVKILQWHAVASWTWDAQDETCG |
Transcript ID | At.12454.1 |
Gene ID | At.12454 |
Gene Name | APC11 |
Pfam domain motif | zf-ANAPC11 |
Motif E-value | 1.6e-42 |
Motif start | 1 |
Motif end | 84 |
Protein seq | >At.12454.1 MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREW QFKE* |
CDS seq | >At.12454.1 ATGAAAGTCAAGATCTTGCAATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCG GATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACG CGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGG CAGTTCAAAGAGTAA |