Microexon ID At_3:1754312:+
Species Arabidopsis thaliana
Coordinates 3:1754312..1754312
Microexon Cluster ID MEP01
Size 1
Phase 1
Pfam Domain Motif zf-ANAPC11
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 19,1,52
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATGAARGTCAARMTYYTGCARTGGCATGCTGTTGCTTCWTGGACWTGGGATGCWCARGATGARACATGTGGS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq A
Microexon Amino Acid seq Q
Microexon-tag DNA Seq ATGAAAGTCAAGATCTTGCAATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGG
Microexon-tag Amino Acid Seq MKVKILQWHAVASWTWDAQDETCG
Microexon-tag spanning region1753961-1754453
Microexon-tag prediction score0.986
Overlapped with the annotated transcript (%) 86.59
New Transcript ID AT3G05870.1x
Reference Transcript ID AT3G05870.1
Gene ID AT3G05870
Gene Name APC11
At_3:1754312:+ does not have available information here.
Microexon DNA seq A
Microexon Amino Acid seq Q
Microexon-tag DNA Seq ATGAAAGTCAAGATCTTGCAATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGG
Microexon-tag Amino Acid seq MKVKILQWHAVASWTWDAQDETCG
Transcript ID At.12454.1
Gene ID At.12454
Gene Name APC11
Pfam domain motif zf-ANAPC11
Motif E-value 1.6e-42
Motif start 1
Motif end 84
Protein seq >At.12454.1
MKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREW
QFKE*
CDS seq >At.12454.1
ATGAAAGTCAAGATCTTGCAATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCG
GATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACG
CGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGG
CAGTTCAAAGAGTAA